Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm25127-201ENSMUST00000083336 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm25583-201ENSMUST00000083413 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm25577-201ENSMUST00000083414 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24414-201ENSMUST00000083434 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24861-201ENSMUST00000083459 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Mir302d-201ENSMUST00000083513 66 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24803-201ENSMUST00000083693 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm23103-201ENSMUST00000083725 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm22580-201ENSMUST00000083727 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24260-201ENSMUST00000083741 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm23732-201ENSMUST00000083751 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm22682-201ENSMUST00000083854 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm25869-201ENSMUST00000083855 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24693-201ENSMUST00000083885 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm26317-201ENSMUST00000083894 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm24448-201ENSMUST00000083979 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm22798-201ENSMUST00000083992 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Snora2b-201ENSMUST00000084005 137 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm10351-201ENSMUST00000087694 125 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm26427-201ENSMUST00000093648 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm22886-201ENSMUST00000093714 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Gm22170-201ENSMUST00000097247 107 ntBASIC3.09□□□□□ -1.91
Shroom4Q1W617 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Shroom4Q1W617 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm23183-201ENSMUST00000122595 323 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm26026-201ENSMUST00000122726 123 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm22036-201ENSMUST00000157279 215 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm22858-201ENSMUST00000174972 76 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm22118-201ENSMUST00000175593 171 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm25450-201ENSMUST00000179144 107 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm25024-201ENSMUST00000179667 104 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm37692-201ENSMUST00000192633 232 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm37290-201ENSMUST00000195775 339 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm43583-201ENSMUST00000199235 303 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm44881-201ENSMUST00000205425 367 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Shroom4Q1W617 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Gm25124-201ENSMUST00000083345 164 ntBASIC3.09□□□□□ -1.92
Shroom4Q1W617 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Shroom4Q1W617 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm11065-201ENSMUST00000111462 228 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm24061-201ENSMUST00000157489 120 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm24392-201ENSMUST00000158136 103 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm22113-201ENSMUST00000158343 104 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm24667-201ENSMUST00000158938 103 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm27477-201ENSMUST00000184649 143 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm28552-201ENSMUST00000190725 388 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm43250-201ENSMUST00000196536 273 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm43284-201ENSMUST00000200103 253 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Gm25755-201ENSMUST00000083396 107 ntBASIC3.08□□□□□ -1.92
Shroom4Q1W617 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm13714-201ENSMUST00000117313 221 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm22213-201ENSMUST00000157564 119 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm23312-201ENSMUST00000158774 102 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm24487-201ENSMUST00000178017 63 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm29022-201ENSMUST00000190702 225 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm37763-201ENSMUST00000193445 120 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm42960-201ENSMUST00000202160 241 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.07□□□□□ -1.92
Shroom4Q1W617 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm26080-201ENSMUST00000104069 131 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm25170-201ENSMUST00000104191 129 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm25496-201ENSMUST00000104430 120 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm16242-201ENSMUST00000117741 334 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm11572-201ENSMUST00000119164 120 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm27510-201ENSMUST00000158214 64 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm22606-201ENSMUST00000158290 103 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm27668-201ENSMUST00000184188 120 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm30341-201ENSMUST00000194363 289 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm37693-201ENSMUST00000194562 234 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm43193-201ENSMUST00000197732 441 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm46194-201ENSMUST00000218136 320 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm23722-201ENSMUST00000083002 130 ntBASIC3.06□□□□□ -1.92
Shroom4Q1W617 Gm23256-201ENSMUST00000102235 110 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Mir466p-201ENSMUST00000103925 89 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm24060-201ENSMUST00000157494 95 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm26157-201ENSMUST00000158974 126 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm22450-201ENSMUST00000179641 107 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm24968-201ENSMUST00000179817 107 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm26071-201ENSMUST00000083261 107 ntBASIC3.05□□□□□ -1.92
Shroom4Q1W617 Gm24521-201ENSMUST00000083958 107 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 305 ms