Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.96□□□□□ -1.78
Col9a1Q05722 Mir410-201ENSMUST00000083563 81 ntBASIC3.96□□□□□ -1.78
Col9a1Q05722 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.96□□□□□ -1.78
Col9a1Q05722 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.96□□□□□ -1.78
Col9a1Q05722 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col9a1Q05722 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col9a1Q05722 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col9a1Q05722 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col9a1Q05722 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col9a1Q05722 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.95□□□□□ -1.78
Col9a1Q05722 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col9a1Q05722 Gm23237-201ENSMUST00000104639 92 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Gm14448-201ENSMUST00000116383 210 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Mir3094-201ENSMUST00000175121 64 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Mir6377-201ENSMUST00000183760 114 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Gm27457-201ENSMUST00000184771 156 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Gm44459-201ENSMUST00000203926 160 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Gm23510-201ENSMUST00000083083 163 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.95□□□□□ -1.78
Col9a1Q05722 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col9a1Q05722 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col9a1Q05722 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm24907-201ENSMUST00000116932 128 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm13268-201ENSMUST00000117485 433 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm24598-201ENSMUST00000122510 74 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm23886-201ENSMUST00000122684 313 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm26415-201ENSMUST00000157673 292 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm25519-201ENSMUST00000158392 127 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm25771-201ENSMUST00000158565 144 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm22398-201ENSMUST00000174941 125 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm25731-201ENSMUST00000175167 125 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm23369-201ENSMUST00000175406 105 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm27446-201ENSMUST00000183963 89 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm44024-201ENSMUST00000203008 476 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Mir155-201ENSMUST00000083463 65 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.94□□□□□ -1.78
Col9a1Q05722 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col9a1Q05722 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col9a1Q05722 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col9a1Q05722 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col9a1Q05722 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm23226-201ENSMUST00000116927 103 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm12213-201ENSMUST00000119924 353 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm22310-201ENSMUST00000157509 116 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm22135-201ENSMUST00000158752 108 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm23302-201ENSMUST00000082710 100 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Mir370-201ENSMUST00000083499 79 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm23040-201ENSMUST00000083869 163 ntBASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col9a1Q05722 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
Col9a1Q05722 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm11704-201ENSMUST00000120031 214 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm24593-201ENSMUST00000122507 106 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm22963-201ENSMUST00000157960 91 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm23858-201ENSMUST00000158384 106 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm22156-201ENSMUST00000158409 141 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm22666-201ENSMUST00000158717 164 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm27532-201ENSMUST00000183726 113 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm27921-201ENSMUST00000183968 108 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm9370-201ENSMUST00000222787 609 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm25200-201ENSMUST00000083094 130 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col9a1Q05722 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.92□□□□□ -1.78
Col9a1Q05722 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col9a1Q05722 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col9a1Q05722 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col9a1Q05722 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col9a1Q05722 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col9a1Q05722 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Col9a1Q05722 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col9a1Q05722 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Col9a1Q05722 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col9a1Q05722 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm22319-201ENSMUST00000157147 122 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm24402-201ENSMUST00000157873 91 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm23113-201ENSMUST00000158477 99 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm26215-201ENSMUST00000158584 139 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm26141-201ENSMUST00000175299 126 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm22245-201ENSMUST00000082479 103 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm25480-201ENSMUST00000083217 133 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Gm23247-201ENSMUST00000083373 107 ntBASIC3.91□□□□□ -1.78
Col9a1Q05722 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col9a1Q05722 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 157.7 ms