Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15235-201ENSMUST00000200572 194 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.77□□□□□ -1.97
Col8a1Q00780 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.77□□□□□ -1.97
Col8a1Q00780 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col8a1Q00780 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col8a1Q00780 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col8a1Q00780 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.77□□□□□ -1.97
Col8a1Q00780 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col8a1Q00780 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Snord14c-201ENSMUST00000101927 86 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm25022-201ENSMUST00000102205 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir344c-201ENSMUST00000103919 92 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm23080-201ENSMUST00000157846 103 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm26360-201ENSMUST00000158872 103 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm26160-201ENSMUST00000158965 63 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm28992-201ENSMUST00000190534 139 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm43898-201ENSMUST00000204456 424 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm25797-201ENSMUST00000082640 107 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm22443-201ENSMUST00000082890 107 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm23727-201ENSMUST00000083352 164 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm25006-201ENSMUST00000083813 107 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.76□□□□□ -1.97
Col8a1Q00780 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.76□□□□□ -1.97
Col8a1Q00780 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm22004-201ENSMUST00000101884 107 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm24122-201ENSMUST00000104107 132 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm24061-201ENSMUST00000157489 120 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm27396-201ENSMUST00000157708 58 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm22483-201ENSMUST00000157986 274 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm24056-201ENSMUST00000158617 146 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm23182-201ENSMUST00000158688 135 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm22665-201ENSMUST00000158720 275 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm4468-201ENSMUST00000170206 294 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm27893-201ENSMUST00000184408 194 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm37116-201ENSMUST00000195161 147 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm43676-201ENSMUST00000197532 540 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Gm22979-201ENSMUST00000082609 159 ntBASIC2.75□□□□□ -1.97
Col8a1Q00780 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col8a1Q00780 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col8a1Q00780 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col8a1Q00780 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Col8a1Q00780 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col8a1Q00780 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm24582-201ENSMUST00000103967 103 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Snord64-201ENSMUST00000104003 67 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm22713-201ENSMUST00000116895 130 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm23716-201ENSMUST00000157348 144 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm26405-201ENSMUST00000158495 100 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm24634-201ENSMUST00000158672 107 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm22192-201ENSMUST00000175128 85 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm27505-201ENSMUST00000185071 110 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm37918-201ENSMUST00000192071 120 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.74□□□□□ -1.97
Col8a1Q00780 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Gm25632-201ENSMUST00000083112 85 ntBASIC2.74□□□□□ -1.97
Col8a1Q00780 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col8a1Q00780 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col8a1Q00780 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col8a1Q00780 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col8a1Q00780 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm12858-201ENSMUST00000121913 208 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm14491-201ENSMUST00000121919 199 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm23183-201ENSMUST00000122595 323 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm26477-201ENSMUST00000122617 323 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm24894-201ENSMUST00000122744 118 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm25060-201ENSMUST00000157374 130 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Mir1951-201ENSMUST00000157981 89 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm22943-201ENSMUST00000158564 76 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm23053-201ENSMUST00000175136 96 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm18546-201ENSMUST00000197245 676 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Mir3068-202ENSMUST00000197755 79 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm24625-201ENSMUST00000082622 130 ntBASIC2.73□□□□□ -1.97
Col8a1Q00780 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col8a1Q00780 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms