Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Gm27313-201ENSMUST00000183500 142 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Gm29037-201ENSMUST00000189092 313 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Gm28506-201ENSMUST00000189937 150 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.04□□□□□ -2.24
Trim43bP86448 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Gm18696-201ENSMUST00000220103 274 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.04□□□□□ -2.24
Trim43bP86448 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Mir196b-201ENSMUST00000083509 85 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.04□□□□□ -2.24
Trim43bP86448 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trim43bP86448 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm12225-201ENSMUST00000117995 298 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm12432-201ENSMUST00000119540 186 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm14392-201ENSMUST00000120332 401 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm11891-201ENSMUST00000121241 619 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm14413-201ENSMUST00000122158 408 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm25543-201ENSMUST00000122678 312 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm23390-201ENSMUST00000157393 106 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm17148-201ENSMUST00000164702 249 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm16399-201ENSMUST00000181423 219 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Mir7052-201ENSMUST00000184821 65 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm29613-201ENSMUST00000185846 313 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm29544-201ENSMUST00000188860 313 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm28808-201ENSMUST00000190978 313 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm38274-201ENSMUST00000195689 148 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm23370-201ENSMUST00000199545 130 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm45403-201ENSMUST00000209453 276 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm23097-201ENSMUST00000083448 105 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Gm26314-201ENSMUST00000083891 107 ntBASIC1.03□□□□□ -2.24
Trim43bP86448 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
Trim43bP86448 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.03□□□□□ -2.25
Trim43bP86448 Gm22003-201ENSMUST00000101885 107 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm22656-201ENSMUST00000104199 171 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trim43bP86448 Gm23535-201ENSMUST00000157542 106 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm25314-201ENSMUST00000178810 79 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm23410-201ENSMUST00000179967 107 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm22756-201ENSMUST00000180118 107 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm19901-201ENSMUST00000192191 495 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm38395-201ENSMUST00000199904 830 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm35736-201ENSMUST00000203681 313 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm22306-201ENSMUST00000082692 107 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm22505-201ENSMUST00000082956 108 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm22363-201ENSMUST00000083100 108 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm23814-201ENSMUST00000083230 102 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm26066-201ENSMUST00000083385 109 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm23095-201ENSMUST00000083446 107 ntBASIC1.02□□□□□ -2.25
Trim43bP86448 Gm13475-201ENSMUST00000119290 234 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm24632-201ENSMUST00000122770 323 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm15899-201ENSMUST00000128586 238 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm24668-201ENSMUST00000158935 104 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm24366-201ENSMUST00000175383 86 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43bP86448 Mir7675-201ENSMUST00000184262 58 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Mir6380-201ENSMUST00000184334 81 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43bP86448 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43bP86448 Gm44491-201ENSMUST00000196794 96 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.01□□□□□ -2.25
Trim43bP86448 Gm44726-201ENSMUST00000203427 217 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm18188-201ENSMUST00000219386 478 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43bP86448 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm25801-201ENSMUST00000082638 106 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Mir22-201ENSMUST00000083595 95 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Gm23731-201ENSMUST00000083749 107 ntBASIC1.01□□□□□ -2.25
Trim43bP86448 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trim43bP86448 Gm45557-201ENSMUST00000210004 1651 ntBASIC1□□□□□ -2.25
Trim43bP86448 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trim43bP86448 Gm26500-201ENSMUST00000101867 106 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm24431-201ENSMUST00000104073 66 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm14287-201ENSMUST00000121060 117 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm3027-201ENSMUST00000167579 451 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm26435-201ENSMUST00000179026 107 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm27656-201ENSMUST00000185055 80 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1□□□□□ -2.25
Trim43bP86448 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trim43bP86448 Gm43993-201ENSMUST00000203972 247 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm45402-201ENSMUST00000211796 223 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1□□□□□ -2.25
Trim43bP86448 AL935138.1-201ENSMUST00000215309 196 ntBASIC1□□□□□ -2.25
Trim43bP86448 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1□□□□□ -2.25
Trim43bP86448 AC116589.3-202ENSMUST00000221770 649 ntBASIC1□□□□□ -2.25
Trim43bP86448 AC116589.6-201ENSMUST00000222252 649 ntBASIC1□□□□□ -2.25
Trim43bP86448 AC164297.3-201ENSMUST00000224238 94 ntBASIC1□□□□□ -2.25
Trim43bP86448 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm24624-201ENSMUST00000082617 164 ntBASIC1□□□□□ -2.25
Trim43bP86448 Gm25274-201ENSMUST00000104296 135 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms