Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm23641-201ENSMUST00000157857 101 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm24678-201ENSMUST00000158756 104 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm25162-201ENSMUST00000158906 159 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm21673-201ENSMUST00000186640 436 ntBASIC0.27□□□□□ -2.37
Cux1P53564 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Cux1P53564 Gm21135-201ENSMUST00000189023 436 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.27□□□□□ -2.37
Cux1P53564 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.27□□□□□ -2.37
Cux1P53564 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.27□□□□□ -2.37
Cux1P53564 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.27□□□□□ -2.37
Cux1P53564 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Cux1P53564 Gm13246-201ENSMUST00000120994 315 ntBASIC0.26□□□□□ -2.37
Cux1P53564 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.26□□□□□ -2.37
Cux1P53564 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Gm44449-201ENSMUST00000203610 153 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Gm5010-201ENSMUST00000213131 260 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Gm24045-201ENSMUST00000083113 98 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.26□□□□□ -2.37
Cux1P53564 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Gm23130-201ENSMUST00000104252 74 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.25□□□□□ -2.37
Cux1P53564 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Cux1P53564 Gm28299-201ENSMUST00000189908 339 ntBASIC0.25□□□□□ -2.37
Cux1P53564 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Cux1P53564 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.25□□□□□ -2.37
Cux1P53564 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Mir10a-201ENSMUST00000083585 110 ntBASIC0.25□□□□□ -2.37
Cux1P53564 Gm23761-201ENSMUST00000158347 104 ntBASIC0.24□□□□□ -2.37
Cux1P53564 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.24□□□□□ -2.37
Cux1P53564 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.24□□□□□ -2.37
Cux1P53564 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.24□□□□□ -2.37
Cux1P53564 Gm25799-201ENSMUST00000082643 107 ntBASIC0.24□□□□□ -2.37
Cux1P53564 Gm23453-201ENSMUST00000083326 106 ntBASIC0.24□□□□□ -2.37
Cux1P53564 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm28283-201ENSMUST00000185509 178 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.23□□□□□ -2.37
Cux1P53564 Mir191-201ENSMUST00000196210 74 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm44396-201ENSMUST00000199843 114 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm18213-201ENSMUST00000207850 178 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm19855-201ENSMUST00000210145 249 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Cux1P53564 Gm22577-201ENSMUST00000083731 109 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Cux1P53564 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Cux1P53564 Gm23118-201ENSMUST00000122657 187 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm23958-201ENSMUST00000157207 105 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm25393-201ENSMUST00000157336 285 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm22339-201ENSMUST00000157718 62 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm24960-201ENSMUST00000157923 90 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm23387-201ENSMUST00000158586 107 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm44345-201ENSMUST00000199560 135 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm29848-201ENSMUST00000203107 295 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm43898-201ENSMUST00000204456 424 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm46997-201ENSMUST00000222108 217 ntBASIC0.23□□□□□ -2.37
Cux1P53564 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Cux1P53564 Gm26377-201ENSMUST00000102184 108 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm16186-201ENSMUST00000120132 216 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm14599-201ENSMUST00000120469 474 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm24168-201ENSMUST00000178825 107 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm27402-201ENSMUST00000183890 120 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm45704-201ENSMUST00000212582 403 ntBASIC0.22□□□□□ -2.37
Cux1P53564 Gm7925-201ENSMUST00000166690 401 ntBASIC0.21□□□□□ -2.38
Cux1P53564 Gm23862-201ENSMUST00000180342 94 ntBASIC0.21□□□□□ -2.38
Cux1P53564 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.21□□□□□ -2.38
Cux1P53564 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Cux1P53564 Gm23516-201ENSMUST00000093728 107 ntBASIC0.21□□□□□ -2.38
Cux1P53564 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.2□□□□□ -2.38
Cux1P53564 Gm18396-201ENSMUST00000177095 361 ntBASIC0.2□□□□□ -2.38
Cux1P53564 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.2□□□□□ -2.38
Cux1P53564 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.2□□□□□ -2.38
Cux1P53564 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Cux1P53564 Gm11351-202ENSMUST00000225724 478 ntBASIC0.2□□□□□ -2.38
Cux1P53564 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Cux1P53564 Gm13368-201ENSMUST00000122443 430 ntBASIC0.19□□□□□ -2.38
Cux1P53564 Gm24963-201ENSMUST00000157916 144 ntBASIC0.19□□□□□ -2.38
Cux1P53564 Gm28435-201ENSMUST00000185496 108 ntBASIC0.19□□□□□ -2.38
Cux1P53564 Gm36984-201ENSMUST00000192770 235 ntBASIC0.19□□□□□ -2.38
Cux1P53564 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Cux1P53564 Gm25772-201ENSMUST00000158574 56 ntBASIC0.18□□□□□ -2.38
Cux1P53564 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Cux1P53564 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Trdv3-201ENSMUST00000198551 309 ntBASIC0.18□□□□□ -2.38
Cux1P53564 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Gm5899-201ENSMUST00000071770 270 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Cux1P53564 Scarna8-201ENSMUST00000158333 131 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Cux1P53564 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Cux1P53564 Gm28257-201ENSMUST00000185244 463 ntBASIC0.18□□□□□ -2.38
Cux1P53564 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.18□□□□□ -2.38
Cux1P53564 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.18□□□□□ -2.38
Cux1P53564 Gm42164-201ENSMUST00000198881 379 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.18□□□□□ -2.38
Cux1P53564 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.18□□□□□ -2.38
Cux1P53564 Gm26249-201ENSMUST00000116708 118 ntBASIC0.17□□□□□ -2.38
Cux1P53564 Gm11792-201ENSMUST00000120640 168 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms