Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm25253-201ENSMUST00000179958 107 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm43993-201ENSMUST00000203972 247 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Gm25078-201ENSMUST00000082530 107 ntBASIC2.52□□□□□ -2.01
Ercc3P49135 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ercc3P49135 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ercc3P49135 Gm25094-201ENSMUST00000103992 131 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm22099-201ENSMUST00000157925 123 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm23548-201ENSMUST00000158963 106 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm26092-201ENSMUST00000179798 97 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm17067-202ENSMUST00000180131 123 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm26200-201ENSMUST00000180273 79 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Mir6997-201ENSMUST00000184313 71 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm19901-201ENSMUST00000192191 495 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm44055-201ENSMUST00000204376 247 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm24316-201ENSMUST00000083041 107 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.51□□□□□ -2.01
Ercc3P49135 Gm23011-201ENSMUST00000104148 132 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm14883-201ENSMUST00000120179 157 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm14919-201ENSMUST00000120839 390 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.5□□□□□ -2.01
Ercc3P49135 Gm23535-201ENSMUST00000157542 106 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm22731-201ENSMUST00000158086 94 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm25450-201ENSMUST00000179144 107 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm44989-201ENSMUST00000204749 217 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm45313-201ENSMUST00000210584 178 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Mir300-201ENSMUST00000083485 79 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Snora69-201ENSMUST00000083708 131 ntBASIC2.5□□□□□ -2.01
Ercc3P49135 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ercc3P49135 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ercc3P49135 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ercc3P49135 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ercc3P49135 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm15526-201ENSMUST00000112504 204 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm12417-201ENSMUST00000119153 403 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm13992-201ENSMUST00000120558 156 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm11904-201ENSMUST00000120562 248 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm15213-201ENSMUST00000122098 216 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm26265-202ENSMUST00000196326 133 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm44959-201ENSMUST00000209127 231 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm24356-201ENSMUST00000082859 106 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm25402-201ENSMUST00000082966 131 ntBASIC2.49□□□□□ -2.01
Ercc3P49135 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm26077-201ENSMUST00000104064 123 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm24835-201ENSMUST00000116777 111 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm11854-201ENSMUST00000117839 446 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm11794-201ENSMUST00000119446 237 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm13967-201ENSMUST00000120404 380 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm24900-201ENSMUST00000158128 134 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ercc3P49135 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ercc3P49135 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ercc3P49135 Gm25930-201ENSMUST00000082785 107 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Mir222-201ENSMUST00000083537 79 ntBASIC2.48□□□□□ -2.01
Ercc3P49135 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ercc3P49135 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ercc3P49135 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ercc3P49135 Gm22494-201ENSMUST00000104495 128 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm13588-201ENSMUST00000120026 135 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Ercc3P49135 Gm22221-201ENSMUST00000157362 103 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm23813-201ENSMUST00000175153 77 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm26435-201ENSMUST00000179026 107 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Mir6406-201ENSMUST00000183592 120 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm27722-201ENSMUST00000183908 76 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm27521-201ENSMUST00000184022 64 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Mir7009-201ENSMUST00000184519 64 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Gm24412-201ENSMUST00000083426 109 ntBASIC2.47□□□□□ -2.01
Ercc3P49135 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ercc3P49135 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Ercc3P49135 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.01
Ercc3P49135 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ercc3P49135 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ercc3P49135 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Gm15002-201ENSMUST00000118406 452 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Gm11388-201ENSMUST00000120908 159 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Gm27723-201ENSMUST00000157398 63 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Gm18546-201ENSMUST00000197245 676 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Mir3961-201ENSMUST00000198795 59 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Gm26107-201ENSMUST00000083972 107 ntBASIC2.46□□□□□ -2.02
Ercc3P49135 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Ercc3P49135 Gm23950-201ENSMUST00000104026 129 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Mir669g-201ENSMUST00000116809 123 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Gm13714-201ENSMUST00000117313 221 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Gm24237-201ENSMUST00000157790 132 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Gm22803-201ENSMUST00000158049 283 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Mir1936-201ENSMUST00000158699 93 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Mir3535-201ENSMUST00000197651 147 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Gm22299-201ENSMUST00000082663 136 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Gm24977-201ENSMUST00000083106 163 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms