Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Rfx1P48377 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.54□□□□□ -1.84
Rfx1P48377 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rfx1P48377 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rfx1P48377 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rfx1P48377 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm22935-201ENSMUST00000103960 104 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm11285-201ENSMUST00000118443 322 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm13913-201ENSMUST00000121126 260 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm15214-201ENSMUST00000122155 470 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm22586-201ENSMUST00000157507 122 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Gm25716-201ENSMUST00000158628 104 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.53□□□□□ -1.84
Rfx1P48377 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.53□□□□□ -1.84
Rfx1P48377 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rfx1P48377 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rfx1P48377 Gm25526-201ENSMUST00000104332 132 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Gm16171-201ENSMUST00000118004 324 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Gm13076-201ENSMUST00000118041 204 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Gm14602-201ENSMUST00000118625 340 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Gm13560-201ENSMUST00000121865 329 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.52□□□□□ -1.85
Rfx1P48377 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.52□□□□□ -1.85
Rfx1P48377 Gm37007-201ENSMUST00000194234 319 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.52□□□□□ -1.85
Rfx1P48377 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.52□□□□□ -1.85
Rfx1P48377 Gm26175-201ENSMUST00000083794 131 ntBASIC3.52□□□□□ -1.85
Rfx1P48377 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
Rfx1P48377 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rfx1P48377 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rfx1P48377 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Rfx1P48377 Gm25711-201ENSMUST00000158633 128 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm25470-201ENSMUST00000175576 111 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm24390-201ENSMUST00000179578 62 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm26097-201ENSMUST00000179642 93 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm44922-201ENSMUST00000206690 90 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm24929-201ENSMUST00000083403 139 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.51□□□□□ -1.85
Rfx1P48377 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rfx1P48377 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rfx1P48377 Gm22380-201ENSMUST00000157479 95 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 Gm22606-201ENSMUST00000158290 103 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 Mir6993-201ENSMUST00000184912 65 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rfx1P48377 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Rfx1P48377 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.5□□□□□ -1.85
Rfx1P48377 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rfx1P48377 Snord89-201ENSMUST00000104516 110 ntBASIC3.49□□□□□ -1.85
Rfx1P48377 Gm6025-201ENSMUST00000121517 201 ntBASIC3.49□□□□□ -1.85
Rfx1P48377 Gm27374-201ENSMUST00000183660 81 ntBASIC3.49□□□□□ -1.85
Rfx1P48377 Gm5010-201ENSMUST00000213131 260 ntBASIC3.49□□□□□ -1.85
Rfx1P48377 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rfx1P48377 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.49□□□□□ -1.85
Rfx1P48377 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rfx1P48377 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Rfx1P48377 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Rfx1P48377 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm16355-201ENSMUST00000128606 231 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.48□□□□□ -1.85
Rfx1P48377 Gm23665-201ENSMUST00000158054 62 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm24736-201ENSMUST00000158862 130 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm25071-201ENSMUST00000175232 70 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm24813-201ENSMUST00000175310 84 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm28591-201ENSMUST00000185259 183 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm28647-201ENSMUST00000188416 197 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.48□□□□□ -1.85
Rfx1P48377 Gm18213-201ENSMUST00000207850 178 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm9370-201ENSMUST00000222787 609 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Rfx1P48377 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.48□□□□□ -1.85
Rfx1P48377 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Rfx1P48377 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Rfx1P48377 Gm15190-201ENSMUST00000120855 276 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.47□□□□□ -1.85
Rfx1P48377 Gm17020-201ENSMUST00000172274 274 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 Mir5123-201ENSMUST00000177794 83 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 Gm44478-201ENSMUST00000204875 114 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.47□□□□□ -1.85
Rfx1P48377 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Rfx1P48377 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Rfx1P48377 Gm24595-201ENSMUST00000122501 110 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Gm23326-201ENSMUST00000157419 105 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Gm23325-201ENSMUST00000157422 129 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Gm16162-201ENSMUST00000162296 297 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Gm27783-201ENSMUST00000183534 105 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.46□□□□□ -1.86
Rfx1P48377 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Rfx1P48377 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 179.6 ms