Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm43583-201ENSMUST00000199235 303 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm5001-201ENSMUST00000204361 331 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm26327-201ENSMUST00000093724 111 ntBASIC-0.55□□□□□ -2.5
HttP42859 Gm13080-201ENSMUST00000120556 420 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.56□□□□□ -2.5
HttP42859 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.56□□□□□ -2.5
HttP42859 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC-0.56□□□□□ -2.5
HttP42859 Gm29022-201ENSMUST00000190702 225 ntBASIC-0.56□□□□□ -2.5
HttP42859 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.56□□□□□ -2.5
HttP42859 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
HttP42859 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm22678-201ENSMUST00000116974 101 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm37934-201ENSMUST00000192902 402 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.56□□□□□ -2.5
HttP42859 AC167669.4-201ENSMUST00000225967 140 ntBASIC-0.56□□□□□ -2.5
HttP42859 Gm14677-201ENSMUST00000117866 486 ntBASIC-0.57□□□□□ -2.5
HttP42859 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.57□□□□□ -2.5
HttP42859 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.57□□□□□ -2.5
HttP42859 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.57□□□□□ -2.5
HttP42859 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.57□□□□□ -2.5
HttP42859 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.57□□□□□ -2.5
HttP42859 AC152979.4-201ENSMUST00000219893 379 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm46997-201ENSMUST00000222108 217 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.57□□□□□ -2.5
HttP42859 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.57□□□□□ -2.5
HttP42859 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.57□□□□□ -2.5
HttP42859 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.57□□□□□ -2.5
HttP42859 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
HttP42859 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC-0.57□□□□□ -2.5
HttP42859 AC112274.2-201ENSMUST00000218436 170 ntBASIC-0.57□□□□□ -2.5
HttP42859 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.57□□□□□ -2.5
HttP42859 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.57□□□□□ -2.5
HttP42859 Gm25915-201ENSMUST00000104265 126 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm8114-201ENSMUST00000172225 484 ntBASIC-0.58□□□□□ -2.5
HttP42859 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm38395-201ENSMUST00000199904 830 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-0.58□□□□□ -2.5
HttP42859 Gm44961-201ENSMUST00000207450 196 ntBASIC-0.58□□□□□ -2.5
HttP42859 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.58□□□□□ -2.5
HttP42859 AC158606.1-201ENSMUST00000220078 325 ntBASIC-0.58□□□□□ -2.5
HttP42859 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
HttP42859 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.58□□□□□ -2.5
HttP42859 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-0.58□□□□□ -2.5
HttP42859 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HttP42859 Snora20-201ENSMUST00000082703 128 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
HttP42859 Gm14358-201ENSMUST00000118458 403 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm23206-201ENSMUST00000122720 184 ntBASIC-0.58□□□□□ -2.5
HttP42859 Gm25933-201ENSMUST00000178943 108 ntBASIC-0.58□□□□□ -2.5
HttP42859 Mir7667-201ENSMUST00000183866 63 ntBASIC-0.58□□□□□ -2.5
HttP42859 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.58□□□□□ -2.5
HttP42859 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.59□□□□□ -2.5
HttP42859 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.59□□□□□ -2.5
HttP42859 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.59□□□□□ -2.5
HttP42859 Gm11384-201ENSMUST00000121376 303 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28838-201ENSMUST00000186338 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm29635-201ENSMUST00000187221 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm29026-201ENSMUST00000187787 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28797-201ENSMUST00000188543 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28855-201ENSMUST00000188680 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28705-201ENSMUST00000189548 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28939-201ENSMUST00000190351 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm28223-201ENSMUST00000190469 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm29092-201ENSMUST00000190768 315 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.59□□□□□ -2.5
HttP42859 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC-0.59□□□□□ -2.5
HttP42859 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm44560-201ENSMUST00000207816 3115 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm4910-201ENSMUST00000119605 366 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm14623-201ENSMUST00000121398 603 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm25115-201ENSMUST00000157187 140 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm24060-201ENSMUST00000157494 95 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm26291-201ENSMUST00000158889 137 ntBASIC-0.59□□□□□ -2.5
HttP42859 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.59□□□□□ -2.5
HttP42859 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.59□□□□□ -2.5
HttP42859 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.59□□□□□ -2.5
HttP42859 Gm23202-201ENSMUST00000104376 129 ntBASIC-0.6□□□□□ -2.5
HttP42859 Gm23854-201ENSMUST00000158378 108 ntBASIC-0.6□□□□□ -2.5
HttP42859 Rnu7-201ENSMUST00000158458 62 ntBASIC-0.6□□□□□ -2.5
HttP42859 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.6□□□□□ -2.5
HttP42859 Gm44988-201ENSMUST00000203835 1161 ntBASIC-0.6□□□□□ -2.5
HttP42859 Gm44487-201ENSMUST00000205145 325 ntBASIC-0.6□□□□□ -2.5
HttP42859 Gm12433-201ENSMUST00000119659 255 ntBASIC-0.6□□□□□ -2.51
HttP42859 Gm37599-201ENSMUST00000193067 489 ntBASIC-0.6□□□□□ -2.51
HttP42859 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.6□□□□□ -2.51
HttP42859 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC-0.6□□□□□ -2.51
HttP42859 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms