Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm11512-201ENSMUST00000119669 663 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm13720-201ENSMUST00000120741 196 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.79□□□□□ -2.28
VhlP40338 Gm23535-201ENSMUST00000157542 106 ntBASIC0.79□□□□□ -2.28
VhlP40338 Rnu7-201ENSMUST00000158458 62 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm23208-201ENSMUST00000158666 127 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VhlP40338 Gm9156-201ENSMUST00000189660 463 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm28848-201ENSMUST00000189984 168 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm38274-201ENSMUST00000195689 148 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm43035-201ENSMUST00000197626 517 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm44726-201ENSMUST00000203427 217 ntBASIC0.79□□□□□ -2.28
VhlP40338 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.79□□□□□ -2.28
VhlP40338 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.79□□□□□ -2.28
VhlP40338 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.79□□□□□ -2.28
VhlP40338 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.79□□□□□ -2.28
VhlP40338 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
VhlP40338 Mir196b-201ENSMUST00000083509 85 ntBASIC0.79□□□□□ -2.28
VhlP40338 Gm23731-201ENSMUST00000083749 107 ntBASIC0.79□□□□□ -2.28
VhlP40338 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
VhlP40338 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VhlP40338 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm13475-201ENSMUST00000119290 234 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm14392-201ENSMUST00000120332 401 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm14413-201ENSMUST00000122158 408 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm23656-201ENSMUST00000122626 112 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm22027-201ENSMUST00000122737 127 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm24630-201ENSMUST00000122768 106 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm24632-201ENSMUST00000122770 323 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.78□□□□□ -2.28
VhlP40338 Gm25559-201ENSMUST00000157182 74 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm25914-201ENSMUST00000157618 153 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm24668-201ENSMUST00000158935 104 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm24085-201ENSMUST00000175172 116 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm22565-201ENSMUST00000175540 69 ntBASIC0.78□□□□□ -2.28
VhlP40338 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.78□□□□□ -2.28
VhlP40338 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.78□□□□□ -2.28
VhlP40338 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.78□□□□□ -2.28
VhlP40338 Mir7675-201ENSMUST00000184262 58 ntBASIC0.78□□□□□ -2.28
VhlP40338 Mir6394-201ENSMUST00000184738 99 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm28995-201ENSMUST00000186625 261 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm38395-201ENSMUST00000199904 830 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm43993-201ENSMUST00000203972 247 ntBASIC0.78□□□□□ -2.28
VhlP40338 Gm44654-201ENSMUST00000208052 329 ntBASIC0.78□□□□□ -2.28
VhlP40338 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.78□□□□□ -2.28
VhlP40338 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.78□□□□□ -2.28
VhlP40338 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VhlP40338 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
VhlP40338 Gm24150-201ENSMUST00000082759 104 ntBASIC0.78□□□□□ -2.28
VhlP40338 Mir221-201ENSMUST00000083488 95 ntBASIC0.78□□□□□ -2.28
VhlP40338 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
VhlP40338 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
VhlP40338 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
VhlP40338 Gm9059-201ENSMUST00000118319 183 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm6829-201ENSMUST00000119858 360 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm14269-201ENSMUST00000120455 306 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm23170-201ENSMUST00000157158 106 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm24005-201ENSMUST00000158459 296 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm24229-201ENSMUST00000158830 118 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm17148-201ENSMUST00000164702 249 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm27313-201ENSMUST00000183500 142 ntBASIC0.77□□□□□ -2.29
VhlP40338 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.77□□□□□ -2.29
VhlP40338 Gm29037-201ENSMUST00000189092 313 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.77□□□□□ -2.29
VhlP40338 Gm23370-201ENSMUST00000199545 130 ntBASIC0.77□□□□□ -2.29
VhlP40338 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.77□□□□□ -2.29
VhlP40338 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.77□□□□□ -2.29
VhlP40338 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.77□□□□□ -2.29
VhlP40338 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.77□□□□□ -2.29
VhlP40338 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
VhlP40338 Snord98-201ENSMUST00000116819 65 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm14803-201ENSMUST00000117163 361 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm12770-201ENSMUST00000121734 462 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm25423-201ENSMUST00000157609 107 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm25371-201ENSMUST00000158162 101 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm24942-201ENSMUST00000158328 114 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm25486-201ENSMUST00000158726 63 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm17052-201ENSMUST00000165496 289 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm17100-201ENSMUST00000168963 272 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm24366-201ENSMUST00000175383 86 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm24020-201ENSMUST00000180156 108 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm28343-201ENSMUST00000185386 112 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm37128-201ENSMUST00000192599 232 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.76□□□□□ -2.29
VhlP40338 Gm46997-201ENSMUST00000222108 217 ntBASIC0.76□□□□□ -2.29
VhlP40338 Gm20102-201ENSMUST00000222445 220 ntBASIC0.76□□□□□ -2.29
VhlP40338 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.76□□□□□ -2.29
VhlP40338 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.76□□□□□ -2.29
VhlP40338 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.76□□□□□ -2.29
VhlP40338 Snord68-201ENSMUST00000082516 86 ntBASIC0.76□□□□□ -2.29
VhlP40338 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.76□□□□□ -2.29
VhlP40338 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm24342-201ENSMUST00000103907 104 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm24915-201ENSMUST00000157288 78 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm23016-201ENSMUST00000158431 62 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm25491-201ENSMUST00000158733 308 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm24510-201ENSMUST00000174965 94 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm26430-201ENSMUST00000178054 107 ntBASIC0.75□□□□□ -2.29
VhlP40338 Gm25314-201ENSMUST00000178810 79 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms