Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Mir3087-201ENSMUST00000199405 56 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm34783-201ENSMUST00000209159 303 ntBASIC1.89□□□□□ -2.11
Traf1P39428 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.89□□□□□ -2.11
Traf1P39428 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.89□□□□□ -2.11
Traf1P39428 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.89□□□□□ -2.11
Traf1P39428 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Traf1P39428 Gm24406-201ENSMUST00000083026 128 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Gm24536-201ENSMUST00000083144 107 ntBASIC1.89□□□□□ -2.11
Traf1P39428 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Traf1P39428 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.89□□□□□ -2.11
Traf1P39428 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Traf1P39428 Gm25832-201ENSMUST00000104140 130 ntBASIC1.88□□□□□ -2.11
Traf1P39428 Gm14882-201ENSMUST00000117216 218 ntBASIC1.88□□□□□ -2.11
Traf1P39428 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.88□□□□□ -2.11
Traf1P39428 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.88□□□□□ -2.11
Traf1P39428 Gm24625-201ENSMUST00000082622 130 ntBASIC1.88□□□□□ -2.11
Traf1P39428 Snora3-201ENSMUST00000083082 132 ntBASIC1.88□□□□□ -2.11
Traf1P39428 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Traf1P39428 Mir223-201ENSMUST00000102112 110 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Traf1P39428 Gm15526-201ENSMUST00000112504 204 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm22027-201ENSMUST00000122737 127 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm25914-201ENSMUST00000157618 153 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Traf1P39428 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.87□□□□□ -2.11
Traf1P39428 Gm37399-201ENSMUST00000195224 416 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm35736-201ENSMUST00000203681 313 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.87□□□□□ -2.11
Traf1P39428 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Gm46997-201ENSMUST00000222108 217 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Mir496a-201ENSMUST00000093627 79 ntBASIC1.87□□□□□ -2.11
Traf1P39428 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Traf1P39428 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Traf1P39428 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Traf1P39428 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Traf1P39428 Gm25805-201ENSMUST00000122788 108 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm22281-201ENSMUST00000157198 103 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm23390-201ENSMUST00000157393 106 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm22082-201ENSMUST00000157587 161 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm26181-201ENSMUST00000157687 106 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm24192-201ENSMUST00000157978 145 ntBASIC1.86□□□□□ -2.11
Traf1P39428 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Traf1P39428 Gm18433-201ENSMUST00000192747 197 ntBASIC1.86□□□□□ -2.11
Traf1P39428 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm44491-201ENSMUST00000196794 96 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.86□□□□□ -2.11
Traf1P39428 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm25929-201ENSMUST00000082784 107 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Gm23242-201ENSMUST00000083055 107 ntBASIC1.86□□□□□ -2.11
Traf1P39428 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Traf1P39428 Gm25992-201ENSMUST00000102437 109 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Gm17052-201ENSMUST00000165496 289 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Gm26400-201ENSMUST00000175012 85 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Gm27271-201ENSMUST00000183509 170 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Gm37845-201ENSMUST00000194977 355 ntBASIC1.85□□□□□ -2.11
Traf1P39428 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.85□□□□□ -2.11
Traf1P39428 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.85□□□□□ -2.11
Traf1P39428 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.85□□□□□ -2.11
Traf1P39428 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.85□□□□□ -2.11
Traf1P39428 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Gm23656-201ENSMUST00000122626 112 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Gm27793-201ENSMUST00000183405 76 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Mir6351-201ENSMUST00000183826 99 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Gm28925-201ENSMUST00000188586 168 ntBASIC1.84□□□□□ -2.11
Traf1P39428 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.84□□□□□ -2.11
Traf1P39428 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Gm25789-201ENSMUST00000083294 76 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Mir32-201ENSMUST00000083610 70 ntBASIC1.84□□□□□ -2.11
Traf1P39428 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Traf1P39428 Gm13714-201ENSMUST00000117313 221 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm14937-201ENSMUST00000119709 208 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm23186-201ENSMUST00000180078 107 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm27265-201ENSMUST00000183559 77 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm27248-201ENSMUST00000184004 166 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm7654-201ENSMUST00000186738 683 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm37918-201ENSMUST00000192071 120 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm42834-201ENSMUST00000196845 256 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm23370-201ENSMUST00000199545 130 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm30155-201ENSMUST00000223458 339 ntBASIC1.83□□□□□ -2.12
Traf1P39428 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Traf1P39428 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Traf1P39428 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Traf1P39428 Gm14782-201ENSMUST00000120151 195 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gm11606-201ENSMUST00000120706 617 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gm28211-201ENSMUST00000190920 315 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gm20144-201ENSMUST00000203031 165 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gm44654-201ENSMUST00000208052 329 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.82□□□□□ -2.12
Traf1P39428 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Traf1P39428 Mir221-201ENSMUST00000083488 95 ntBASIC1.82□□□□□ -2.12
Traf1P39428 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms