Protein–RNA interactions for Protein: P28078

H2-DMa, Class II histocompatibility antigen, M alpha chain, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMaP28078 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm24805-201ENSMUST00000082931 104 ntBASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm24406-201ENSMUST00000083026 128 ntBASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm24765-201ENSMUST00000083691 103 ntBASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm10360-201ENSMUST00000097219 272 ntBASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.41□□□□□ -2.18
H2-DMaP28078 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.4□□□□□ -2.18
H2-DMaP28078 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.4□□□□□ -2.18
H2-DMaP28078 Gm23950-201ENSMUST00000104026 129 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm24632-201ENSMUST00000122770 323 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm22281-201ENSMUST00000157198 103 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm25371-201ENSMUST00000158162 101 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm26024-201ENSMUST00000158657 322 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm22665-201ENSMUST00000158720 275 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm25450-201ENSMUST00000179144 107 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm27511-201ENSMUST00000183502 127 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm43035-201ENSMUST00000197626 517 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm44419-201ENSMUST00000203338 229 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm45456-201ENSMUST00000210841 243 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Gm11351-202ENSMUST00000225724 478 ntBASIC1.4□□□□□ -2.19
H2-DMaP28078 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
H2-DMaP28078 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm14674-201ENSMUST00000117816 342 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm11572-201ENSMUST00000119164 120 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm8121-201ENSMUST00000153583 499 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm23355-201ENSMUST00000177614 107 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm25284-201ENSMUST00000180345 141 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm23148-201ENSMUST00000180367 107 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm9156-201ENSMUST00000189660 463 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm36946-201ENSMUST00000192706 435 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
H2-DMaP28078 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm25930-201ENSMUST00000082785 107 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm25258-201ENSMUST00000083049 107 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm25789-201ENSMUST00000083294 76 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm26107-201ENSMUST00000083972 107 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.39□□□□□ -2.19
H2-DMaP28078 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
H2-DMaP28078 Mir758-201ENSMUST00000103260 81 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm13714-201ENSMUST00000117313 221 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm12647-201ENSMUST00000118977 265 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm23232-201ENSMUST00000157300 105 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm26181-201ENSMUST00000157687 106 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm22803-201ENSMUST00000158049 283 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm22114-201ENSMUST00000177756 107 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm21885-201ENSMUST00000178891 327 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm5900-201ENSMUST00000179862 375 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Mir6388-201ENSMUST00000184417 75 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm37313-201ENSMUST00000191673 290 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm37404-201ENSMUST00000195726 359 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm43220-201ENSMUST00000199299 282 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm44473-201ENSMUST00000204039 152 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm45907-201ENSMUST00000213023 193 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm25078-201ENSMUST00000082530 107 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Snord118-201ENSMUST00000082965 135 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Gm26493-201ENSMUST00000083155 136 ntBASIC1.38□□□□□ -2.19
H2-DMaP28078 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
H2-DMaP28078 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
H2-DMaP28078 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
H2-DMaP28078 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm15861-201ENSMUST00000120979 339 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm24851-201ENSMUST00000158028 103 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm25491-201ENSMUST00000158733 308 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Mir6351-201ENSMUST00000183826 99 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Mir7683-201ENSMUST00000183842 61 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Mir7062-201ENSMUST00000185038 66 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm28992-201ENSMUST00000190534 139 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm37338-201ENSMUST00000191986 127 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm37918-201ENSMUST00000192071 120 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm44491-201ENSMUST00000196794 96 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm24625-201ENSMUST00000082622 130 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm24536-201ENSMUST00000083144 107 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Gm24163-201ENSMUST00000093660 132 ntBASIC1.37□□□□□ -2.19
H2-DMaP28078 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
H2-DMaP28078 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
H2-DMaP28078 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.36□□□□□ -2.19
H2-DMaP28078 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
H2-DMaP28078 Gm24630-201ENSMUST00000122768 106 ntBASIC1.36□□□□□ -2.19
H2-DMaP28078 Gm14298-201ENSMUST00000139032 237 ntBASIC1.36□□□□□ -2.19
H2-DMaP28078 Gm16356-201ENSMUST00000143300 169 ntBASIC1.36□□□□□ -2.19
H2-DMaP28078 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.36□□□□□ -2.19
H2-DMaP28078 Gm24222-201ENSMUST00000158834 93 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 213.7 ms