Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm25423-201ENSMUST00000157609 107 ntBASIC1.26□□□□□ -2.21
P20040 Gm23558-201ENSMUST00000157823 80 ntBASIC1.26□□□□□ -2.21
P20040 Gm24902-201ENSMUST00000158126 123 ntBASIC1.26□□□□□ -2.21
P20040 Gm23208-201ENSMUST00000158666 127 ntBASIC1.26□□□□□ -2.21
P20040 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
P20040 Gm24618-201ENSMUST00000177718 94 ntBASIC1.26□□□□□ -2.21
P20040 Gm23953-201ENSMUST00000178214 94 ntBASIC1.26□□□□□ -2.21
P20040 Gm26332-201ENSMUST00000179813 94 ntBASIC1.26□□□□□ -2.21
P20040 Gm22863-201ENSMUST00000180265 94 ntBASIC1.26□□□□□ -2.21
P20040 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.26□□□□□ -2.21
P20040 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.26□□□□□ -2.21
P20040 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
P20040 Gm25357-201ENSMUST00000082745 72 ntBASIC1.26□□□□□ -2.21
P20040 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.26□□□□□ -2.21
P20040 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.26□□□□□ -2.21
P20040 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.26□□□□□ -2.21
P20040 Gm25773-201ENSMUST00000116718 127 ntBASIC1.25□□□□□ -2.21
P20040 Mir1b-201ENSMUST00000117012 122 ntBASIC1.25□□□□□ -2.21
P20040 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
P20040 Gm25909-201ENSMUST00000157619 121 ntBASIC1.25□□□□□ -2.21
P20040 Gm24853-201ENSMUST00000158026 121 ntBASIC1.25□□□□□ -2.21
P20040 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.25□□□□□ -2.21
P20040 Gm24487-201ENSMUST00000178017 63 ntBASIC1.25□□□□□ -2.21
P20040 Gm7258-201ENSMUST00000179317 300 ntBASIC1.25□□□□□ -2.21
P20040 Gm20257-202ENSMUST00000188643 130 ntBASIC1.25□□□□□ -2.21
P20040 Gm28414-201ENSMUST00000190111 294 ntBASIC1.25□□□□□ -2.21
P20040 Gm21064-202ENSMUST00000190583 278 ntBASIC1.25□□□□□ -2.21
P20040 Mir3087-201ENSMUST00000199405 56 ntBASIC1.25□□□□□ -2.21
P20040 Gm43367-201ENSMUST00000199986 625 ntBASIC1.25□□□□□ -2.21
P20040 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.25□□□□□ -2.21
P20040 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.25□□□□□ -2.21
P20040 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.25□□□□□ -2.21
P20040 Gm10092-201ENSMUST00000077110 180 ntBASIC1.25□□□□□ -2.21
P20040 Snord14a-201ENSMUST00000082807 87 ntBASIC1.25□□□□□ -2.21
P20040 Gm23721-201ENSMUST00000083005 107 ntBASIC1.25□□□□□ -2.21
P20040 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
P20040 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.25□□□□□ -2.21
P20040 Gm26080-201ENSMUST00000104069 131 ntBASIC1.24□□□□□ -2.21
P20040 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.24□□□□□ -2.21
P20040 Gm22281-201ENSMUST00000157198 103 ntBASIC1.24□□□□□ -2.21
P20040 Gm24551-201ENSMUST00000158645 92 ntBASIC1.24□□□□□ -2.21
P20040 Gm24810-201ENSMUST00000175317 70 ntBASIC1.24□□□□□ -2.21
P20040 Gm27793-201ENSMUST00000183405 76 ntBASIC1.24□□□□□ -2.21
P20040 Gm27271-201ENSMUST00000183509 170 ntBASIC1.24□□□□□ -2.21
P20040 Gm18291-201ENSMUST00000190791 301 ntBASIC1.24□□□□□ -2.21
P20040 Gm37337-201ENSMUST00000192601 993 ntBASIC1.24□□□□□ -2.21
P20040 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
P20040 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.24□□□□□ -2.21
P20040 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.24□□□□□ -2.21
P20040 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.24□□□□□ -2.21
P20040 Gm24152-201ENSMUST00000082764 163 ntBASIC1.24□□□□□ -2.21
P20040 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
P20040 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.23□□□□□ -2.21
P20040 Gm24366-201ENSMUST00000175383 86 ntBASIC1.23□□□□□ -2.21
P20040 Gm17067-202ENSMUST00000180131 123 ntBASIC1.23□□□□□ -2.21
P20040 Gm28489-201ENSMUST00000186655 316 ntBASIC1.23□□□□□ -2.21
P20040 Gm37693-201ENSMUST00000194562 234 ntBASIC1.23□□□□□ -2.21
P20040 Gm44960-201ENSMUST00000207403 141 ntBASIC1.23□□□□□ -2.21
P20040 Gm5010-201ENSMUST00000213131 260 ntBASIC1.23□□□□□ -2.21
P20040 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.23□□□□□ -2.21
P20040 Gm16976-205ENSMUST00000227324 226 ntBASIC1.23□□□□□ -2.21
P20040 Gm25636-201ENSMUST00000082666 133 ntBASIC1.23□□□□□ -2.21
P20040 Gm24356-201ENSMUST00000082859 106 ntBASIC1.23□□□□□ -2.21
P20040 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.22□□□□□ -2.21
P20040 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.22□□□□□ -2.21
P20040 Mir293-201ENSMUST00000104841 80 ntBASIC1.22□□□□□ -2.21
P20040 Gm23122-201ENSMUST00000157645 103 ntBASIC1.22□□□□□ -2.21
P20040 Gm25434-201ENSMUST00000158278 167 ntBASIC1.22□□□□□ -2.21
P20040 Gm29613-201ENSMUST00000185846 313 ntBASIC1.22□□□□□ -2.21
P20040 Gm29661-201ENSMUST00000186781 315 ntBASIC1.22□□□□□ -2.21
P20040 Gm29544-201ENSMUST00000188860 313 ntBASIC1.22□□□□□ -2.21
P20040 Gm29308-201ENSMUST00000188863 315 ntBASIC1.22□□□□□ -2.21
P20040 Gm28808-201ENSMUST00000190978 313 ntBASIC1.22□□□□□ -2.21
P20040 Gm42622-201ENSMUST00000197229 355 ntBASIC1.22□□□□□ -2.21
P20040 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.22□□□□□ -2.21
P20040 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.22□□□□□ -2.21
P20040 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
P20040 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
P20040 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.21□□□□□ -2.22
P20040 Gm28110-201ENSMUST00000185782 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29057-201ENSMUST00000186468 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28737-201ENSMUST00000186808 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29147-201ENSMUST00000186846 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29118-201ENSMUST00000186908 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28433-201ENSMUST00000187085 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29227-201ENSMUST00000187139 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28759-201ENSMUST00000187621 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28831-201ENSMUST00000187739 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28200-201ENSMUST00000187778 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29034-201ENSMUST00000188099 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28752-201ENSMUST00000188340 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29378-201ENSMUST00000188723 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28569-201ENSMUST00000188748 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28120-201ENSMUST00000188812 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28369-201ENSMUST00000188993 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28537-201ENSMUST00000189026 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28909-201ENSMUST00000189406 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28861-201ENSMUST00000189681 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28717-201ENSMUST00000189950 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29180-201ENSMUST00000190003 315 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms