Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm13246-201ENSMUST00000120994 315 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Gm25436-201ENSMUST00000158275 145 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Gm24813-201ENSMUST00000175310 84 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Gm24572-201ENSMUST00000175505 88 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Gm4479-201ENSMUST00000178807 171 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Gm26864-201ENSMUST00000181346 156 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.62□□□□□ -1.83
Msx1P13297 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.62□□□□□ -1.83
Msx1P13297 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.62□□□□□ -1.83
Msx1P13297 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Msx1P13297 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Msx1P13297 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Msx1P13297 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Msx1P13297 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Msx1P13297 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Msx1P13297 Gm22590-201ENSMUST00000104247 128 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm25376-201ENSMUST00000104340 133 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Mir466l-201ENSMUST00000104866 121 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm15069-201ENSMUST00000117792 192 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm15068-201ENSMUST00000119796 192 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm12276-201ENSMUST00000121709 301 ntBASIC3.61□□□□□ -1.83
Msx1P13297 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Msx1P13297 Gm23326-201ENSMUST00000157419 105 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm22380-201ENSMUST00000157479 95 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm24014-201ENSMUST00000157728 157 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Mir30e-201ENSMUST00000083475 92 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Gm25513-201ENSMUST00000083861 162 ntBASIC3.61□□□□□ -1.83
Msx1P13297 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx1P13297 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msx1P13297 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Msx1P13297 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msx1P13297 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx1P13297 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msx1P13297 Gm26074-201ENSMUST00000104063 129 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm24375-201ENSMUST00000104397 132 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm14816-201ENSMUST00000117174 294 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm13831-201ENSMUST00000118764 302 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm3788-201ENSMUST00000119949 136 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm23753-201ENSMUST00000157575 149 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Mir1927-201ENSMUST00000158579 109 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Mir6938-201ENSMUST00000184173 63 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Gm44666-201ENSMUST00000208544 391 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msx1P13297 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.6□□□□□ -1.83
Msx1P13297 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx1P13297 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.6□□□□□ -1.83
Msx1P13297 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Msx1P13297 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Msx1P13297 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Msx1P13297 Gm26076-201ENSMUST00000104065 105 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Msx1P13297 Gm13076-201ENSMUST00000118041 204 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Gm23788-201ENSMUST00000122535 106 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Gm22221-201ENSMUST00000157362 103 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Mir6993-201ENSMUST00000184912 65 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.59□□□□□ -1.83
Msx1P13297 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC3.59□□□□□ -1.83
Msx1P13297 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Gm23507-201ENSMUST00000083078 107 ntBASIC3.59□□□□□ -1.83
Msx1P13297 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.59□□□□□ -1.83
Msx1P13297 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.59□□□□□ -1.83
Msx1P13297 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Msx1P13297 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Msx1P13297 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Msx1P13297 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Msx1P13297 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Msx1P13297 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Msx1P13297 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Msx1P13297 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.58□□□□□ -1.84
Msx1P13297 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Msx1P13297 Gm23015-201ENSMUST00000104145 128 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Msx1P13297 Gm11598-201ENSMUST00000119257 357 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm23957-201ENSMUST00000157209 90 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm24559-201ENSMUST00000157519 121 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm6625-201ENSMUST00000177870 272 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm25633-201ENSMUST00000178565 107 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm44024-201ENSMUST00000203008 476 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm32381-201ENSMUST00000203192 476 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm22979-201ENSMUST00000082609 159 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm22805-201ENSMUST00000082739 107 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Gm24615-201ENSMUST00000083268 113 ntBASIC3.58□□□□□ -1.84
Msx1P13297 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Msx1P13297 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Msx1P13297 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.58□□□□□ -1.84
Msx1P13297 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Msx1P13297 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Msx1P13297 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Msx1P13297 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Msx1P13297 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms