Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Snora7a-201ENSMUST00000082629 140 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm24030-201ENSMUST00000083931 164 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.44□□□□□ -1.86
RaraP11416 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.44□□□□□ -1.86
RaraP11416 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.44□□□□□ -1.86
RaraP11416 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RaraP11416 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RaraP11416 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.43□□□□□ -1.86
RaraP11416 Mir7578-201ENSMUST00000183455 82 ntBASIC3.43□□□□□ -1.86
RaraP11416 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.43□□□□□ -1.86
RaraP11416 Mir7657-201ENSMUST00000196051 57 ntBASIC3.43□□□□□ -1.86
RaraP11416 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.43□□□□□ -1.86
RaraP11416 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.43□□□□□ -1.86
RaraP11416 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.43□□□□□ -1.86
RaraP11416 Snord61-201ENSMUST00000083176 71 ntBASIC3.43□□□□□ -1.86
RaraP11416 Gm25409-201ENSMUST00000083764 131 ntBASIC3.43□□□□□ -1.86
RaraP11416 Gm10161-201ENSMUST00000091506 204 ntBASIC3.43□□□□□ -1.86
RaraP11416 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.43□□□□□ -1.86
RaraP11416 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.43□□□□□ -1.86
RaraP11416 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RaraP11416 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RaraP11416 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RaraP11416 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RaraP11416 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RaraP11416 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
RaraP11416 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RaraP11416 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.42□□□□□ -1.86
RaraP11416 Gm24008-201ENSMUST00000157733 138 ntBASIC3.42□□□□□ -1.86
RaraP11416 Gm24277-201ENSMUST00000158661 104 ntBASIC3.42□□□□□ -1.86
RaraP11416 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.42□□□□□ -1.86
RaraP11416 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.42□□□□□ -1.86
RaraP11416 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RaraP11416 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
RaraP11416 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RaraP11416 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
RaraP11416 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
RaraP11416 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.41□□□□□ -1.86
RaraP11416 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RaraP11416 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RaraP11416 Gm25377-201ENSMUST00000104334 129 ntBASIC3.41□□□□□ -1.86
RaraP11416 Gm13560-201ENSMUST00000121865 329 ntBASIC3.41□□□□□ -1.86
RaraP11416 Mir6402-201ENSMUST00000183406 80 ntBASIC3.41□□□□□ -1.86
RaraP11416 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.41□□□□□ -1.86
RaraP11416 Gm44459-201ENSMUST00000203926 160 ntBASIC3.41□□□□□ -1.86
RaraP11416 Gm43898-201ENSMUST00000204456 424 ntBASIC3.41□□□□□ -1.86
RaraP11416 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.41□□□□□ -1.86
RaraP11416 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.41□□□□□ -1.86
RaraP11416 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RaraP11416 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.41□□□□□ -1.86
RaraP11416 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.41□□□□□ -1.86
RaraP11416 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RaraP11416 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
RaraP11416 Gm22678-201ENSMUST00000116974 101 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm15466-201ENSMUST00000122299 333 ntBASIC3.4□□□□□ -1.87
RaraP11416 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm26477-201ENSMUST00000122617 323 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm24896-201ENSMUST00000122741 135 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.4□□□□□ -1.87
RaraP11416 Gm25835-201ENSMUST00000158917 144 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm25380-201ENSMUST00000175463 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm26061-201ENSMUST00000175584 108 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm24641-201ENSMUST00000178055 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm25484-201ENSMUST00000178217 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm26138-201ENSMUST00000179236 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm22821-201ENSMUST00000179288 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm21064-202ENSMUST00000190583 278 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm38364-201ENSMUST00000191814 179 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm42844-201ENSMUST00000200355 112 ntBASIC3.4□□□□□ -1.87
RaraP11416 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.4□□□□□ -1.87
RaraP11416 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm23140-201ENSMUST00000082487 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm23298-201ENSMUST00000083181 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm24614-201ENSMUST00000083269 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm22057-201ENSMUST00000083387 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm25516-201ENSMUST00000083857 107 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm23040-201ENSMUST00000083869 163 ntBASIC3.4□□□□□ -1.87
RaraP11416 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RaraP11416 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.4□□□□□ -1.87
RaraP11416 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.39□□□□□ -1.87
RaraP11416 Gm26011-201ENSMUST00000104410 104 ntBASIC3.39□□□□□ -1.87
RaraP11416 Gm11471-201ENSMUST00000121824 198 ntBASIC3.39□□□□□ -1.87
RaraP11416 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RaraP11416 Gm26100-201ENSMUST00000157245 127 ntBASIC3.39□□□□□ -1.87
RaraP11416 Gm23665-201ENSMUST00000158054 62 ntBASIC3.39□□□□□ -1.87
RaraP11416 Gm25977-201ENSMUST00000158697 85 ntBASIC3.39□□□□□ -1.87
RaraP11416 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.39□□□□□ -1.87
RaraP11416 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.39□□□□□ -1.87
RaraP11416 Gm23445-201ENSMUST00000082800 107 ntBASIC3.39□□□□□ -1.87
RaraP11416 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RaraP11416 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RaraP11416 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RaraP11416 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RaraP11416 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RaraP11416 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RaraP11416 Gm13076-201ENSMUST00000118041 204 ntBASIC3.38□□□□□ -1.87
RaraP11416 Gm12086-201ENSMUST00000120863 228 ntBASIC3.38□□□□□ -1.87
RaraP11416 Gm27934-201ENSMUST00000158795 63 ntBASIC3.38□□□□□ -1.87
RaraP11416 Gm20613-201ENSMUST00000175828 345 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms