Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Gm46997-201ENSMUST00000222108 217 ntBASIC1.45□□□□□ -2.18
Lire1P11260 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.45□□□□□ -2.18
Lire1P11260 Gm22149-201ENSMUST00000104442 136 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm13341-201ENSMUST00000120780 672 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm22281-201ENSMUST00000157198 103 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Mir1967-201ENSMUST00000157789 82 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm17052-201ENSMUST00000165496 289 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm24799-201ENSMUST00000178431 79 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm27894-201ENSMUST00000184177 92 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm19123-201ENSMUST00000190716 651 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm18433-201ENSMUST00000192747 197 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm43199-201ENSMUST00000200019 307 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Lire1P11260 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.44□□□□□ -2.18
Lire1P11260 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.44□□□□□ -2.18
Lire1P11260 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm25357-201ENSMUST00000082745 72 ntBASIC1.44□□□□□ -2.18
Lire1P11260 Gm22074-201ENSMUST00000158595 113 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm24348-201ENSMUST00000158710 130 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm27817-201ENSMUST00000184302 233 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.43□□□□□ -2.18
Lire1P11260 Gm38395-201ENSMUST00000199904 830 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm43406-201ENSMUST00000200356 334 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm45403-201ENSMUST00000209453 276 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm19855-201ENSMUST00000210145 249 ntBASIC1.43□□□□□ -2.18
Lire1P11260 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm23097-201ENSMUST00000083448 105 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Gm24494-201ENSMUST00000083804 81 ntBASIC1.43□□□□□ -2.18
Lire1P11260 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Lire1P11260 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm22935-201ENSMUST00000103960 104 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm13720-201ENSMUST00000120741 196 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm24895-201ENSMUST00000122742 74 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm22113-201ENSMUST00000158343 104 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm25486-201ENSMUST00000158726 63 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm26200-201ENSMUST00000180273 79 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Mir6240-201ENSMUST00000184281 117 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm42834-201ENSMUST00000196845 256 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Gm20102-201ENSMUST00000222445 220 ntBASIC1.42□□□□□ -2.18
Lire1P11260 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
Lire1P11260 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Lire1P11260 Gm13475-201ENSMUST00000119290 234 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Gm26181-201ENSMUST00000157687 106 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Gm17113-201ENSMUST00000170118 171 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Gm21064-202ENSMUST00000190583 278 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Gm42774-201ENSMUST00000198854 283 ntBASIC1.41□□□□□ -2.18
Lire1P11260 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.41□□□□□ -2.18
Lire1P11260 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.41□□□□□ -2.18
Lire1P11260 BC022960-201ENSMUST00000119987 1815 ntBASIC1.4□□□□□ -2.18
Lire1P11260 Gm23836-201ENSMUST00000104434 129 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm13714-201ENSMUST00000117313 221 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.4□□□□□ -2.19
Lire1P11260 Gm26393-201ENSMUST00000157625 129 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm25831-201ENSMUST00000158924 163 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm22929-201ENSMUST00000175517 107 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm23419-201ENSMUST00000175523 84 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm44010-201ENSMUST00000204432 331 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm45815-201ENSMUST00000220241 146 ntBASIC1.4□□□□□ -2.19
Lire1P11260 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.4□□□□□ -2.19
Lire1P11260 Gm26082-201ENSMUST00000104070 127 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Gm23016-201ENSMUST00000158431 62 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Gm37918-201ENSMUST00000192071 120 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Gm45402-201ENSMUST00000211796 223 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Mir320-201ENSMUST00000083594 82 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.39□□□□□ -2.19
Lire1P11260 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Lire1P11260 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm11386-201ENSMUST00000117761 347 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm14392-201ENSMUST00000120332 401 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm14413-201ENSMUST00000122158 408 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm25052-201ENSMUST00000122661 158 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm27793-201ENSMUST00000183405 76 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Mir7665-201ENSMUST00000184907 63 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm28414-201ENSMUST00000190111 294 ntBASIC1.38□□□□□ -2.19
Lire1P11260 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm25128-201ENSMUST00000083339 76 ntBASIC1.38□□□□□ -2.19
Lire1P11260 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.38□□□□□ -2.19
Lire1P11260 Gm25958-201ENSMUST00000175114 71 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm25314-201ENSMUST00000178810 79 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm17067-202ENSMUST00000180131 123 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm37128-201ENSMUST00000192599 232 ntBASIC1.37□□□□□ -2.19
Lire1P11260 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.37□□□□□ -2.19
Lire1P11260 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm24038-201ENSMUST00000082872 159 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm24261-201ENSMUST00000083744 104 ntBASIC1.37□□□□□ -2.19
Lire1P11260 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.36□□□□□ -2.19
Lire1P11260 Gm24308-201ENSMUST00000177773 114 ntBASIC1.36□□□□□ -2.19
Lire1P11260 Mir7091-201ENSMUST00000184075 79 ntBASIC1.36□□□□□ -2.19
Lire1P11260 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Lire1P11260 Mir6962-201ENSMUST00000199512 63 ntBASIC1.36□□□□□ -2.19
Lire1P11260 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Lire1P11260 Gm24588-201ENSMUST00000116696 83 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm14923-201ENSMUST00000118270 155 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm11522-201ENSMUST00000120533 176 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms