Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm44464-201ENSMUST00000198010 138 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm23443-201ENSMUST00000082916 128 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Mir30e-201ENSMUST00000083475 92 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm42993-201ENSMUST00000196856 7325 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.99□□□□□ -1.93
Hoxd3P09027 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hoxd3P09027 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm25833-201ENSMUST00000104137 133 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm23015-201ENSMUST00000104145 128 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm15466-201ENSMUST00000122299 333 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm15733-201ENSMUST00000132957 242 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm23234-201ENSMUST00000157304 134 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm24061-201ENSMUST00000157489 120 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm24505-201ENSMUST00000157682 126 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm25888-201ENSMUST00000157778 302 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm22163-201ENSMUST00000158408 135 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm22638-201ENSMUST00000179674 107 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm28282-201ENSMUST00000186072 186 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm37343-201ENSMUST00000192542 111 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 AC125379.1-201ENSMUST00000221928 111 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm23790-201ENSMUST00000083013 107 ntBASIC2.98□□□□□ -1.93
Hoxd3P09027 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hoxd3P09027 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
Hoxd3P09027 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hoxd3P09027 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm24913-201ENSMUST00000157286 107 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm22221-201ENSMUST00000157362 103 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Mir3094-201ENSMUST00000175121 64 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm24813-201ENSMUST00000175310 84 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm22129-201ENSMUST00000179034 107 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Mir6402-201ENSMUST00000183406 80 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm44024-201ENSMUST00000203008 476 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm26449-201ENSMUST00000082452 104 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm22979-201ENSMUST00000082609 159 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Gm22304-201ENSMUST00000082688 129 ntBASIC2.97□□□□□ -1.93
Hoxd3P09027 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Hoxd3P09027 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm12335-201ENSMUST00000119738 327 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm25572-201ENSMUST00000157527 172 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm23113-201ENSMUST00000158477 99 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm25771-201ENSMUST00000158565 144 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm34779-201ENSMUST00000210036 263 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.96□□□□□ -1.94
Hoxd3P09027 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm24615-201ENSMUST00000083268 113 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.96□□□□□ -1.94
Hoxd3P09027 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Hoxd3P09027 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Hoxd3P09027 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Hoxd3P09027 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hoxd3P09027 AC153522.2-201ENSMUST00000218389 3853 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Hoxd3P09027 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hoxd3P09027 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm37655-201ENSMUST00000193968 4123 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm24581-201ENSMUST00000103962 133 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm23858-201ENSMUST00000158384 106 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 Mir1927-201ENSMUST00000158579 109 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Hoxd3P09027 AC187103.4-202ENSMUST00000225091 230 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 Gm25480-201ENSMUST00000083217 133 ntBASIC2.95□□□□□ -1.94
Hoxd3P09027 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Hoxd3P09027 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Hoxd3P09027 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Hoxd3P09027 Gm10287-202ENSMUST00000180599 4059 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 Snord78-201ENSMUST00000104032 66 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 n-R5s219-201ENSMUST00000104328 132 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 Gm13885-201ENSMUST00000117569 187 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 Defa-ps9-201ENSMUST00000118264 276 ntBASIC2.94□□□□□ -1.94
Hoxd3P09027 Gm12213-201ENSMUST00000119924 353 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms