Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm22026-201ENSMUST00000122735 281 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.41□□□□□ -2.02
Col3a1P08121 Gm22321-201ENSMUST00000157152 104 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Gm25599-201ENSMUST00000157816 103 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Nron-204ENSMUST00000158971 370 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Gm25024-201ENSMUST00000179667 104 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Mir7679-201ENSMUST00000183379 63 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Gm10813-201ENSMUST00000099936 90 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.41□□□□□ -2.02
Col3a1P08121 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col3a1P08121 Snord19-201ENSMUST00000104609 76 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm11065-201ENSMUST00000111462 228 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm11819-201ENSMUST00000122192 372 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm23571-201ENSMUST00000180073 127 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Mir6335-201ENSMUST00000184081 98 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm29597-201ENSMUST00000188035 308 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.4□□□□□ -2.02
Col3a1P08121 Gm36189-201ENSMUST00000204113 523 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.4□□□□□ -2.02
Col3a1P08121 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col3a1P08121 Gm22062-201ENSMUST00000082563 107 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Gm25813-201ENSMUST00000082748 191 ntBASIC2.4□□□□□ -2.02
Col3a1P08121 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Col3a1P08121 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.4□□□□□ -2.03
Col3a1P08121 Gm23184-201ENSMUST00000122594 131 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm26026-201ENSMUST00000122726 123 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm23640-201ENSMUST00000157860 104 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm22098-201ENSMUST00000157930 85 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm22315-201ENSMUST00000158010 143 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm25015-201ENSMUST00000158400 128 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm7329-201ENSMUST00000185915 210 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.39□□□□□ -2.03
Col3a1P08121 Gm37037-201ENSMUST00000194475 424 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm24148-201ENSMUST00000082762 80 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm23517-201ENSMUST00000082830 192 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm25411-201ENSMUST00000083760 151 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col3a1P08121 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col3a1P08121 Gm15183-201ENSMUST00000118933 348 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm24839-201ENSMUST00000122602 107 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm22027-201ENSMUST00000122737 127 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm22654-201ENSMUST00000157874 105 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm24394-201ENSMUST00000158141 123 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Gm22447-201ENSMUST00000158155 92 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Mir6352-201ENSMUST00000184495 116 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col3a1P08121 Gm45522-201ENSMUST00000210784 166 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.39□□□□□ -2.03
Col3a1P08121 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col3a1P08121 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm24172-201ENSMUST00000104127 117 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm13273-201ENSMUST00000119737 159 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm13913-201ENSMUST00000121126 260 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm11204-201ENSMUST00000122438 147 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm23234-201ENSMUST00000157304 134 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Mir669k-201ENSMUST00000177742 127 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm25673-201ENSMUST00000179957 127 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.38□□□□□ -2.03
Col3a1P08121 Gm29022-201ENSMUST00000190702 225 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm42647-201ENSMUST00000195939 459 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm7065-201ENSMUST00000222150 474 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm22245-201ENSMUST00000082479 103 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Gm22297-201ENSMUST00000083312 106 ntBASIC2.38□□□□□ -2.03
Col3a1P08121 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
Col3a1P08121 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm11460-201ENSMUST00000118200 361 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.37□□□□□ -2.03
Col3a1P08121 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Col3a1P08121 Gm26414-201ENSMUST00000157674 269 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm22384-201ENSMUST00000158187 104 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm26022-201ENSMUST00000158663 108 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm25615-201ENSMUST00000177836 94 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.37□□□□□ -2.03
Col3a1P08121 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.37□□□□□ -2.03
Col3a1P08121 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Col3a1P08121 Gm25124-201ENSMUST00000083345 164 ntBASIC2.37□□□□□ -2.03
Col3a1P08121 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col3a1P08121 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col3a1P08121 Gm23982-201ENSMUST00000157141 106 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm22611-201ENSMUST00000158288 150 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm26004-201ENSMUST00000158804 116 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm25162-201ENSMUST00000158906 159 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Mir8106-201ENSMUST00000184520 139 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.36□□□□□ -2.03
Col3a1P08121 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm43955-201ENSMUST00000204332 142 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms