Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm25069-201ENSMUST00000175238 86 ntBASIC1.18□□□□□ -2.22
TnfP06804 Gm25314-201ENSMUST00000178810 79 ntBASIC1.18□□□□□ -2.22
TnfP06804 Mir7675-201ENSMUST00000184262 58 ntBASIC1.18□□□□□ -2.22
TnfP06804 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.18□□□□□ -2.22
TnfP06804 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.18□□□□□ -2.22
TnfP06804 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.18□□□□□ -2.22
TnfP06804 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.18□□□□□ -2.22
TnfP06804 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.18□□□□□ -2.22
TnfP06804 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TnfP06804 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
TnfP06804 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.17□□□□□ -2.22
TnfP06804 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TnfP06804 Gm11386-201ENSMUST00000117761 347 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm26089-201ENSMUST00000157898 107 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm24942-201ENSMUST00000158328 114 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm22944-201ENSMUST00000158662 133 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm17052-201ENSMUST00000165496 289 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TnfP06804 Gm5010-201ENSMUST00000213131 260 ntBASIC1.17□□□□□ -2.22
TnfP06804 Gm46997-201ENSMUST00000222108 217 ntBASIC1.17□□□□□ -2.22
TnfP06804 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.17□□□□□ -2.22
TnfP06804 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.17□□□□□ -2.22
TnfP06804 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.17□□□□□ -2.22
TnfP06804 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TnfP06804 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm22663-201ENSMUST00000158721 102 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm23339-201ENSMUST00000158962 139 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm24510-201ENSMUST00000174965 94 ntBASIC1.16□□□□□ -2.22
TnfP06804 Mir6381-201ENSMUST00000183426 87 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28343-201ENSMUST00000185386 112 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28110-201ENSMUST00000185782 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29057-201ENSMUST00000186468 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28737-201ENSMUST00000186808 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29147-201ENSMUST00000186846 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29118-201ENSMUST00000186908 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28433-201ENSMUST00000187085 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29227-201ENSMUST00000187139 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28759-201ENSMUST00000187621 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28831-201ENSMUST00000187739 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29034-201ENSMUST00000188099 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28752-201ENSMUST00000188340 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28569-201ENSMUST00000188748 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28120-201ENSMUST00000188812 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28369-201ENSMUST00000188993 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28537-201ENSMUST00000189026 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28861-201ENSMUST00000189681 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28717-201ENSMUST00000189950 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29180-201ENSMUST00000190003 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29575-201ENSMUST00000190597 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29631-201ENSMUST00000191065 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm28160-201ENSMUST00000191229 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm29469-201ENSMUST00000191448 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm37128-201ENSMUST00000192599 232 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm37693-201ENSMUST00000194562 234 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm37129-201ENSMUST00000195791 315 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm45402-201ENSMUST00000211796 223 ntBASIC1.16□□□□□ -2.22
TnfP06804 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.16□□□□□ -2.22
TnfP06804 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.16□□□□□ -2.22
TnfP06804 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.16□□□□□ -2.22
TnfP06804 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TnfP06804 Gm25801-201ENSMUST00000082638 106 ntBASIC1.16□□□□□ -2.22
TnfP06804 BC022960-201ENSMUST00000119987 1815 ntBASIC1.16□□□□□ -2.22
TnfP06804 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.16□□□□□ -2.22
TnfP06804 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TnfP06804 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.15□□□□□ -2.23
TnfP06804 Gm28409-201ENSMUST00000187064 103 ntBASIC1.15□□□□□ -2.23
TnfP06804 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.15□□□□□ -2.23
TnfP06804 Gm44726-201ENSMUST00000203427 217 ntBASIC1.15□□□□□ -2.23
TnfP06804 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.15□□□□□ -2.23
TnfP06804 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.15□□□□□ -2.23
TnfP06804 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TnfP06804 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.14□□□□□ -2.23
TnfP06804 Mir293-201ENSMUST00000104841 80 ntBASIC1.14□□□□□ -2.23
TnfP06804 Gm24915-201ENSMUST00000157288 78 ntBASIC1.14□□□□□ -2.23
TnfP06804 Gm22537-201ENSMUST00000158172 199 ntBASIC1.14□□□□□ -2.23
TnfP06804 Gm25715-201ENSMUST00000158627 125 ntBASIC1.14□□□□□ -2.23
TnfP06804 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
TnfP06804 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.14□□□□□ -2.23
TnfP06804 Gm20102-201ENSMUST00000222445 220 ntBASIC1.14□□□□□ -2.23
TnfP06804 Mir544-201ENSMUST00000103813 78 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm22656-201ENSMUST00000104199 171 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm26301-201ENSMUST00000104813 95 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
TnfP06804 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm12225-201ENSMUST00000117995 298 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm14923-201ENSMUST00000118270 155 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm13729-201ENSMUST00000120328 406 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm13992-201ENSMUST00000120558 156 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm11254-201ENSMUST00000122368 653 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm15899-201ENSMUST00000128586 238 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm23169-201ENSMUST00000157157 112 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm3027-201ENSMUST00000167579 451 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm29661-201ENSMUST00000186781 315 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm29308-201ENSMUST00000188863 315 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm28414-201ENSMUST00000190111 294 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm9227-201ENSMUST00000194733 566 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm42774-201ENSMUST00000198854 283 ntBASIC1.13□□□□□ -2.23
TnfP06804 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.13□□□□□ -2.23
TnfP06804 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms