Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm27517-201ENSMUST00000184347 236 ntBASIC1.7□□□□□ -2.14
P04224 Gm28912-201ENSMUST00000189001 234 ntBASIC1.7□□□□□ -2.14
P04224 Gm44384-201ENSMUST00000200208 114 ntBASIC1.7□□□□□ -2.14
P04224 Gm43505-201ENSMUST00000200579 139 ntBASIC1.7□□□□□ -2.14
P04224 Gm44419-201ENSMUST00000203338 229 ntBASIC1.7□□□□□ -2.14
P04224 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.7□□□□□ -2.14
P04224 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.7□□□□□ -2.14
P04224 Mir293-201ENSMUST00000104841 80 ntBASIC1.69□□□□□ -2.14
P04224 Mir873a-201ENSMUST00000104863 77 ntBASIC1.69□□□□□ -2.14
P04224 Gm22491-201ENSMUST00000157190 102 ntBASIC1.69□□□□□ -2.14
P04224 Gm24010-201ENSMUST00000157731 282 ntBASIC1.69□□□□□ -2.14
P04224 Mir6419-201ENSMUST00000184784 113 ntBASIC1.69□□□□□ -2.14
P04224 Gm37404-201ENSMUST00000195726 359 ntBASIC1.69□□□□□ -2.14
P04224 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.69□□□□□ -2.14
P04224 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
P04224 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
P04224 Gm11606-201ENSMUST00000120706 617 ntBASIC1.68□□□□□ -2.14
P04224 Gm6025-201ENSMUST00000121517 201 ntBASIC1.68□□□□□ -2.14
P04224 Gm22215-201ENSMUST00000157558 96 ntBASIC1.68□□□□□ -2.14
P04224 Gm25914-201ENSMUST00000157618 153 ntBASIC1.68□□□□□ -2.14
P04224 Gm25863-201ENSMUST00000158249 329 ntBASIC1.68□□□□□ -2.14
P04224 Gm25051-201ENSMUST00000158602 249 ntBASIC1.68□□□□□ -2.14
P04224 Gm22500-201ENSMUST00000158982 99 ntBASIC1.68□□□□□ -2.14
P04224 Gm22114-201ENSMUST00000177756 107 ntBASIC1.68□□□□□ -2.14
P04224 Mir6916-201ENSMUST00000184514 63 ntBASIC1.68□□□□□ -2.14
P04224 Gm28418-201ENSMUST00000186179 423 ntBASIC1.68□□□□□ -2.14
P04224 Gm29661-201ENSMUST00000186781 315 ntBASIC1.68□□□□□ -2.14
P04224 Gm29308-201ENSMUST00000188863 315 ntBASIC1.68□□□□□ -2.14
P04224 Gm23370-201ENSMUST00000199545 130 ntBASIC1.68□□□□□ -2.14
P04224 Gm45296-201ENSMUST00000209625 205 ntBASIC1.68□□□□□ -2.14
P04224 Gm5010-201ENSMUST00000213131 260 ntBASIC1.68□□□□□ -2.14
P04224 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.68□□□□□ -2.14
P04224 Gm26111-201ENSMUST00000083969 106 ntBASIC1.68□□□□□ -2.14
P04224 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
P04224 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
P04224 Gm24116-201ENSMUST00000103975 107 ntBASIC1.67□□□□□ -2.14
P04224 Mir3096-201ENSMUST00000116685 71 ntBASIC1.67□□□□□ -2.14
P04224 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.67□□□□□ -2.14
P04224 Mir3057-201ENSMUST00000175040 91 ntBASIC1.67□□□□□ -2.14
P04224 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.67□□□□□ -2.14
P04224 Gm27540-201ENSMUST00000184950 187 ntBASIC1.67□□□□□ -2.14
P04224 Gm37693-201ENSMUST00000194562 234 ntBASIC1.67□□□□□ -2.14
P04224 Gm45543-201ENSMUST00000209327 88 ntBASIC1.67□□□□□ -2.14
P04224 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.67□□□□□ -2.14
P04224 Gm25357-201ENSMUST00000082745 72 ntBASIC1.67□□□□□ -2.14
P04224 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.66□□□□□ -2.14
P04224 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
P04224 Mir759-201ENSMUST00000103254 98 ntBASIC1.66□□□□□ -2.14
P04224 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
P04224 Gm24274-201ENSMUST00000116787 124 ntBASIC1.66□□□□□ -2.14
P04224 Gm12956-201ENSMUST00000122184 414 ntBASIC1.66□□□□□ -2.14
P04224 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
P04224 Gm22603-201ENSMUST00000157603 96 ntBASIC1.66□□□□□ -2.14
P04224 Gm22537-201ENSMUST00000158172 199 ntBASIC1.66□□□□□ -2.14
P04224 Gm22386-201ENSMUST00000158192 129 ntBASIC1.66□□□□□ -2.14
P04224 Gm43587-201ENSMUST00000199590 204 ntBASIC1.66□□□□□ -2.14
P04224 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.66□□□□□ -2.14
P04224 Gm45754-201ENSMUST00000212380 279 ntBASIC1.66□□□□□ -2.14
P04224 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.66□□□□□ -2.14
P04224 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.66□□□□□ -2.14
P04224 Gm25079-201ENSMUST00000082529 203 ntBASIC1.66□□□□□ -2.14
P04224 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
P04224 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
P04224 Gm23175-201ENSMUST00000104371 132 ntBASIC1.65□□□□□ -2.15
P04224 Gm25318-201ENSMUST00000122554 314 ntBASIC1.65□□□□□ -2.15
P04224 Gm22082-201ENSMUST00000157587 161 ntBASIC1.65□□□□□ -2.15
P04224 Gm23474-201ENSMUST00000158884 75 ntBASIC1.65□□□□□ -2.15
P04224 Gm27399-201ENSMUST00000184250 78 ntBASIC1.65□□□□□ -2.15
P04224 Mir7047-201ENSMUST00000184595 64 ntBASIC1.65□□□□□ -2.15
P04224 Gm27544-201ENSMUST00000185069 155 ntBASIC1.65□□□□□ -2.15
P04224 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.65□□□□□ -2.15
P04224 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.65□□□□□ -2.15
P04224 Gm37763-201ENSMUST00000193445 120 ntBASIC1.65□□□□□ -2.15
P04224 Mir3535-201ENSMUST00000197651 147 ntBASIC1.65□□□□□ -2.15
P04224 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.65□□□□□ -2.15
P04224 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.65□□□□□ -2.15
P04224 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.65□□□□□ -2.15
P04224 Gm24966-201ENSMUST00000082443 79 ntBASIC1.65□□□□□ -2.15
P04224 Gm25793-201ENSMUST00000083287 107 ntBASIC1.65□□□□□ -2.15
P04224 Gm24277-201ENSMUST00000158661 104 ntBASIC1.64□□□□□ -2.15
P04224 Gm29037-201ENSMUST00000189092 313 ntBASIC1.64□□□□□ -2.15
P04224 Gm37778-201ENSMUST00000191732 190 ntBASIC1.64□□□□□ -2.15
P04224 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.64□□□□□ -2.15
P04224 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.64□□□□□ -2.15
P04224 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.64□□□□□ -2.15
P04224 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
P04224 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
P04224 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
P04224 Gm24098-201ENSMUST00000102075 109 ntBASIC1.63□□□□□ -2.15
P04224 Gm25381-201ENSMUST00000102078 109 ntBASIC1.63□□□□□ -2.15
P04224 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.63□□□□□ -2.15
P04224 Gm12512-201ENSMUST00000119620 217 ntBASIC1.63□□□□□ -2.15
P04224 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.63□□□□□ -2.15
P04224 Gm22727-201ENSMUST00000158090 116 ntBASIC1.63□□□□□ -2.15
P04224 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
P04224 Gm7958-201ENSMUST00000178255 468 ntBASIC1.63□□□□□ -2.15
P04224 Gm7950-201ENSMUST00000179633 468 ntBASIC1.63□□□□□ -2.15
P04224 Gm29512-201ENSMUST00000185544 315 ntBASIC1.63□□□□□ -2.15
P04224 Gm28110-201ENSMUST00000185782 315 ntBASIC1.63□□□□□ -2.15
P04224 Gm29057-201ENSMUST00000186468 315 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 408.1 ms