Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm22935-201ENSMUST00000103960 104 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm22674-201ENSMUST00000104413 131 ntBASIC2.52□□□□□ -2.01
Best1O88870 Mir875-201ENSMUST00000104698 78 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm24835-201ENSMUST00000116777 111 ntBASIC2.52□□□□□ -2.01
Best1O88870 Mir1195-201ENSMUST00000116818 98 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.52□□□□□ -2.01
Best1O88870 Gm24736-201ENSMUST00000158862 130 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm25643-201ENSMUST00000158874 103 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm24082-201ENSMUST00000175175 83 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm25470-201ENSMUST00000175576 111 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.52□□□□□ -2.01
Best1O88870 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm42960-201ENSMUST00000202160 241 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm45879-201ENSMUST00000212521 392 ntBASIC2.52□□□□□ -2.01
Best1O88870 Gm26495-201ENSMUST00000083152 137 ntBASIC2.52□□□□□ -2.01
Best1O88870 Mir151-201ENSMUST00000083678 68 ntBASIC2.52□□□□□ -2.01
Best1O88870 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Best1O88870 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.52□□□□□ -2.01
Best1O88870 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.52□□□□□ -2.01
Best1O88870 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.51□□□□□ -2.01
Best1O88870 Mir669g-201ENSMUST00000116809 123 ntBASIC2.51□□□□□ -2.01
Best1O88870 Mir1898-201ENSMUST00000122643 83 ntBASIC2.51□□□□□ -2.01
Best1O88870 Mir3076-201ENSMUST00000175415 60 ntBASIC2.51□□□□□ -2.01
Best1O88870 Gm23090-201ENSMUST00000177331 78 ntBASIC2.51□□□□□ -2.01
Best1O88870 Gm26092-201ENSMUST00000179798 97 ntBASIC2.51□□□□□ -2.01
Best1O88870 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.51□□□□□ -2.01
Best1O88870 Gm28900-201ENSMUST00000185232 156 ntBASIC2.51□□□□□ -2.01
Best1O88870 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.51□□□□□ -2.01
Best1O88870 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.51□□□□□ -2.01
Best1O88870 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.51□□□□□ -2.01
Best1O88870 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.51□□□□□ -2.01
Best1O88870 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Best1O88870 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Best1O88870 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Best1O88870 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Best1O88870 Gm14491-201ENSMUST00000121919 199 ntBASIC2.5□□□□□ -2.01
Best1O88870 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.5□□□□□ -2.01
Best1O88870 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm25371-201ENSMUST00000158162 101 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm26405-201ENSMUST00000158495 100 ntBASIC2.5□□□□□ -2.01
Best1O88870 Mir6540-201ENSMUST00000184886 108 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm27979-201ENSMUST00000185126 56 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Best1O88870 Gm11351-202ENSMUST00000225724 478 ntBASIC2.5□□□□□ -2.01
Best1O88870 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Best1O88870 Snora33-201ENSMUST00000093556 129 ntBASIC2.5□□□□□ -2.01
Best1O88870 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.5□□□□□ -2.01
Best1O88870 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Best1O88870 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm24283-201ENSMUST00000104233 107 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm23803-201ENSMUST00000104610 132 ntBASIC2.49□□□□□ -2.01
Best1O88870 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm12042-201ENSMUST00000120479 301 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm14922-201ENSMUST00000121131 163 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Best1O88870 Gm25113-201ENSMUST00000157185 143 ntBASIC2.49□□□□□ -2.01
Best1O88870 Mir3092-201ENSMUST00000174954 96 ntBASIC2.49□□□□□ -2.01
Best1O88870 Mir6917-201ENSMUST00000184111 61 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm27330-201ENSMUST00000184689 132 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.49□□□□□ -2.01
Best1O88870 Gm22248-201ENSMUST00000082482 150 ntBASIC2.49□□□□□ -2.01
Best1O88870 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.48□□□□□ -2.01
Best1O88870 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Best1O88870 Gm26154-201ENSMUST00000102339 96 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm11285-201ENSMUST00000118443 322 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm22651-201ENSMUST00000157872 94 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm22416-201ENSMUST00000158590 88 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm25119-201ENSMUST00000158815 88 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm22450-201ENSMUST00000179641 107 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm25473-201ENSMUST00000180191 107 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.48□□□□□ -2.01
Best1O88870 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm24856-201ENSMUST00000082809 107 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm26071-201ENSMUST00000083261 107 ntBASIC2.48□□□□□ -2.01
Best1O88870 Mir107-201ENSMUST00000083660 87 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm24521-201ENSMUST00000083958 107 ntBASIC2.48□□□□□ -2.01
Best1O88870 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Best1O88870 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.48□□□□□ -2.01
Best1O88870 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Best1O88870 Gm24670-201ENSMUST00000104154 132 ntBASIC2.47□□□□□ -2.01
Best1O88870 Mir293-201ENSMUST00000104841 80 ntBASIC2.47□□□□□ -2.01
Best1O88870 Gm16171-201ENSMUST00000118004 324 ntBASIC2.47□□□□□ -2.01
Best1O88870 Mir1949-201ENSMUST00000157434 141 ntBASIC2.47□□□□□ -2.01
Best1O88870 Gm23219-201ENSMUST00000158123 87 ntBASIC2.47□□□□□ -2.01
Best1O88870 Gm24277-201ENSMUST00000158661 104 ntBASIC2.47□□□□□ -2.01
Best1O88870 Gm27421-201ENSMUST00000184729 167 ntBASIC2.47□□□□□ -2.01
Best1O88870 Gm27545-201ENSMUST00000184755 202 ntBASIC2.47□□□□□ -2.01
Best1O88870 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.47□□□□□ -2.01
Best1O88870 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.47□□□□□ -2.01
Best1O88870 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Best1O88870 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Best1O88870 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Best1O88870 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Best1O88870 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.46□□□□□ -2.02
Best1O88870 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Best1O88870 Gm23033-201ENSMUST00000157996 134 ntBASIC2.46□□□□□ -2.02
Best1O88870 Gm25615-201ENSMUST00000177836 94 ntBASIC2.46□□□□□ -2.02
Best1O88870 Gm45344-201ENSMUST00000211610 341 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms