Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm29229-201ENSMUST00000188874 323 ntBASIC1.64□□□□□ -2.15
ClppO88696 Gm28288-201ENSMUST00000191019 214 ntBASIC1.64□□□□□ -2.15
ClppO88696 Gm25820-201ENSMUST00000198589 127 ntBASIC1.64□□□□□ -2.15
ClppO88696 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.64□□□□□ -2.15
ClppO88696 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.64□□□□□ -2.15
ClppO88696 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.63□□□□□ -2.15
ClppO88696 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
ClppO88696 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ClppO88696 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ClppO88696 Gm24079-201ENSMUST00000104352 132 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm11420-201ENSMUST00000120047 402 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm24262-201ENSMUST00000157431 144 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm22082-201ENSMUST00000157587 161 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm22665-201ENSMUST00000158720 275 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm25253-201ENSMUST00000179958 107 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm27271-201ENSMUST00000183509 170 ntBASIC1.63□□□□□ -2.15
ClppO88696 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.63□□□□□ -2.15
ClppO88696 Snord42a-201ENSMUST00000082606 65 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm23377-201ENSMUST00000082943 126 ntBASIC1.63□□□□□ -2.15
ClppO88696 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.62□□□□□ -2.15
ClppO88696 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ClppO88696 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
ClppO88696 Gm15162-201ENSMUST00000119325 283 ntBASIC1.62□□□□□ -2.15
ClppO88696 Gm13518-201ENSMUST00000120018 233 ntBASIC1.62□□□□□ -2.15
ClppO88696 Gm22598-201ENSMUST00000157600 127 ntBASIC1.62□□□□□ -2.15
ClppO88696 Snord13-201ENSMUST00000157627 104 ntBASIC1.62□□□□□ -2.15
ClppO88696 Gm22085-201ENSMUST00000158344 110 ntBASIC1.62□□□□□ -2.15
ClppO88696 Gm24390-201ENSMUST00000179578 62 ntBASIC1.62□□□□□ -2.15
ClppO88696 Gm27248-201ENSMUST00000184004 166 ntBASIC1.62□□□□□ -2.15
ClppO88696 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.62□□□□□ -2.15
ClppO88696 Mir496a-201ENSMUST00000093627 79 ntBASIC1.62□□□□□ -2.15
ClppO88696 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
ClppO88696 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
ClppO88696 Gm22021-201ENSMUST00000104353 107 ntBASIC1.61□□□□□ -2.15
ClppO88696 Mir1b-201ENSMUST00000117012 122 ntBASIC1.61□□□□□ -2.15
ClppO88696 Mir1936-201ENSMUST00000158699 93 ntBASIC1.61□□□□□ -2.15
ClppO88696 Gm25035-201ENSMUST00000175414 77 ntBASIC1.61□□□□□ -2.15
ClppO88696 Snord87-201ENSMUST00000175437 87 ntBASIC1.61□□□□□ -2.15
ClppO88696 Gm45456-201ENSMUST00000210841 243 ntBASIC1.61□□□□□ -2.15
ClppO88696 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.61□□□□□ -2.15
ClppO88696 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ClppO88696 Gm24805-201ENSMUST00000082931 104 ntBASIC1.61□□□□□ -2.15
ClppO88696 Gm10360-201ENSMUST00000097219 272 ntBASIC1.61□□□□□ -2.15
ClppO88696 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ClppO88696 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ClppO88696 Mir223-201ENSMUST00000102112 110 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm25832-201ENSMUST00000104140 130 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm14882-201ENSMUST00000117216 218 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm22080-201ENSMUST00000157591 106 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm20477-201ENSMUST00000174028 280 ntBASIC1.6□□□□□ -2.15
ClppO88696 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.6□□□□□ -2.15
ClppO88696 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm27793-201ENSMUST00000183405 76 ntBASIC1.6□□□□□ -2.15
ClppO88696 Mir7683-201ENSMUST00000183842 61 ntBASIC1.6□□□□□ -2.15
ClppO88696 Mir6905-201ENSMUST00000184228 70 ntBASIC1.6□□□□□ -2.15
ClppO88696 Mir6388-201ENSMUST00000184417 75 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm28453-203ENSMUST00000187041 189 ntBASIC1.6□□□□□ -2.15
ClppO88696 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm29107-201ENSMUST00000190910 347 ntBASIC1.6□□□□□ -2.15
ClppO88696 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.6□□□□□ -2.15
ClppO88696 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm24625-201ENSMUST00000082622 130 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm24536-201ENSMUST00000083144 107 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gm26329-201ENSMUST00000093723 110 ntBASIC1.6□□□□□ -2.15
ClppO88696 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ClppO88696 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm9059-201ENSMUST00000118319 183 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm14782-201ENSMUST00000120151 195 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm14678-201ENSMUST00000121396 482 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm25805-201ENSMUST00000122788 108 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm22217-201ENSMUST00000157556 313 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm22315-201ENSMUST00000158010 143 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm23921-201ENSMUST00000175258 107 ntBASIC1.59□□□□□ -2.15
ClppO88696 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.59□□□□□ -2.15
ClppO88696 Gm44483-201ENSMUST00000197203 97 ntBASIC1.59□□□□□ -2.15
ClppO88696 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
ClppO88696 Gm46997-201ENSMUST00000222108 217 ntBASIC1.59□□□□□ -2.15
ClppO88696 Snord118-201ENSMUST00000082965 135 ntBASIC1.59□□□□□ -2.15
ClppO88696 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
ClppO88696 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.58□□□□□ -2.16
ClppO88696 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.58□□□□□ -2.16
ClppO88696 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ClppO88696 Gm8121-201ENSMUST00000153583 499 ntBASIC1.58□□□□□ -2.16
ClppO88696 Gm26405-201ENSMUST00000158495 100 ntBASIC1.58□□□□□ -2.16
ClppO88696 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.58□□□□□ -2.16
ClppO88696 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.58□□□□□ -2.16
ClppO88696 Gm28717-201ENSMUST00000189950 315 ntBASIC1.58□□□□□ -2.16
ClppO88696 Gm44491-201ENSMUST00000196794 96 ntBASIC1.58□□□□□ -2.16
ClppO88696 Gm23625-201ENSMUST00000082457 100 ntBASIC1.58□□□□□ -2.16
ClppO88696 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.58□□□□□ -2.16
ClppO88696 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ClppO88696 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ClppO88696 Gm13992-201ENSMUST00000120558 156 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm15861-201ENSMUST00000120979 339 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm25279-201ENSMUST00000122608 133 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ClppO88696 Gm23779-201ENSMUST00000157938 64 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm23854-201ENSMUST00000158378 108 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm22075-201ENSMUST00000158599 192 ntBASIC1.57□□□□□ -2.16
ClppO88696 Gm26159-201ENSMUST00000158968 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms