Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.69□□□□□ -2.14
Cldn5O54942 Mir320-201ENSMUST00000083594 82 ntBASIC1.69□□□□□ -2.14
Cldn5O54942 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.69□□□□□ -2.14
Cldn5O54942 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.69□□□□□ -2.14
Cldn5O54942 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Cldn5O54942 Mir223-201ENSMUST00000102112 110 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cldn5O54942 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm22494-201ENSMUST00000104495 128 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm22027-201ENSMUST00000122737 127 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm22281-201ENSMUST00000157198 103 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm27793-201ENSMUST00000183405 76 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm28912-201ENSMUST00000189001 234 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Cldn5O54942 Gm35736-201ENSMUST00000203681 313 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Gm46997-201ENSMUST00000222108 217 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 Mir32-201ENSMUST00000083610 70 ntBASIC1.68□□□□□ -2.14
Cldn5O54942 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cldn5O54942 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cldn5O54942 Mir301b-201ENSMUST00000102333 97 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm13992-201ENSMUST00000120558 156 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm14980-201ENSMUST00000121247 736 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm6025-201ENSMUST00000121517 201 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm17052-201ENSMUST00000165496 289 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Mir6419-201ENSMUST00000184784 113 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm20144-201ENSMUST00000203031 165 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 Gm44654-201ENSMUST00000208052 329 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.67□□□□□ -2.14
Cldn5O54942 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cldn5O54942 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cldn5O54942 Gm14782-201ENSMUST00000120151 195 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm23390-201ENSMUST00000157393 106 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm25914-201ENSMUST00000157618 153 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm24504-201ENSMUST00000157679 100 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm24510-201ENSMUST00000174965 94 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Mir3057-201ENSMUST00000175040 91 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm23921-201ENSMUST00000175258 107 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm23793-201ENSMUST00000179396 117 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm27898-201ENSMUST00000183987 80 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm29229-201ENSMUST00000188874 323 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm28288-201ENSMUST00000191019 214 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm37918-201ENSMUST00000192071 120 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm23404-201ENSMUST00000082543 97 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm22364-201ENSMUST00000083097 98 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm25789-201ENSMUST00000083294 76 ntBASIC1.66□□□□□ -2.14
Cldn5O54942 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cldn5O54942 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cldn5O54942 Mir873a-201ENSMUST00000104863 77 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Mir3096-201ENSMUST00000116685 71 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm23656-201ENSMUST00000122626 112 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm24174-201ENSMUST00000158933 111 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm42834-201ENSMUST00000196845 256 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Snora3-201ENSMUST00000083082 132 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm25578-201ENSMUST00000083406 104 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.65□□□□□ -2.15
Cldn5O54942 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Cldn5O54942 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cldn5O54942 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Cldn5O54942 Gm26080-201ENSMUST00000104069 131 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm14937-201ENSMUST00000119709 208 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm15115-201ENSMUST00000121145 264 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm25831-201ENSMUST00000158924 163 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Mir3087-201ENSMUST00000199405 56 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm43976-201ENSMUST00000203637 235 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm44687-201ENSMUST00000204975 235 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cldn5O54942 Gm26329-201ENSMUST00000093723 110 ntBASIC1.64□□□□□ -2.15
Cldn5O54942 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cldn5O54942 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Cldn5O54942 Gm23013-201ENSMUST00000104146 106 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm11606-201ENSMUST00000120706 617 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cldn5O54942 Gm27248-201ENSMUST00000184004 166 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm27421-201ENSMUST00000184729 167 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.63□□□□□ -2.15
Cldn5O54942 Gm28717-201ENSMUST00000189950 315 ntBASIC1.63□□□□□ -2.15
Cldn5O54942 Gm45754-201ENSMUST00000212380 279 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms