Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm22299-201ENSMUST00000082663 136 ntBASIC2.19□□□□□ -2.06
DffbO54788 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.18□□□□□ -2.06
DffbO54788 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
DffbO54788 Gm12721-201ENSMUST00000120621 268 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm24598-201ENSMUST00000122510 74 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
DffbO54788 Gm23980-201ENSMUST00000157135 158 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm23600-201ENSMUST00000157260 71 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm2962-201ENSMUST00000159266 336 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm17052-201ENSMUST00000165496 289 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm26435-201ENSMUST00000179026 107 ntBASIC2.18□□□□□ -2.06
DffbO54788 Mir6916-201ENSMUST00000184514 63 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm27421-201ENSMUST00000184729 167 ntBASIC2.18□□□□□ -2.06
DffbO54788 Mir7215-201ENSMUST00000200383 51 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm45508-201ENSMUST00000209298 299 ntBASIC2.18□□□□□ -2.06
DffbO54788 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm26493-201ENSMUST00000083155 136 ntBASIC2.18□□□□□ -2.06
DffbO54788 Mir423-201ENSMUST00000083584 109 ntBASIC2.18□□□□□ -2.06
DffbO54788 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
DffbO54788 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.17□□□□□ -2.06
DffbO54788 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
DffbO54788 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.17□□□□□ -2.06
DffbO54788 Mir767-201ENSMUST00000103256 107 ntBASIC2.17□□□□□ -2.06
DffbO54788 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm26026-201ENSMUST00000122726 123 ntBASIC2.17□□□□□ -2.06
DffbO54788 Trav20-201ENSMUST00000142754 347 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm23901-201ENSMUST00000157570 107 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm24291-201ENSMUST00000157633 162 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm22535-201ENSMUST00000158174 119 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm25654-201ENSMUST00000158467 88 ntBASIC2.17□□□□□ -2.06
DffbO54788 Snord11-201ENSMUST00000158468 84 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
DffbO54788 Gm25939-201ENSMUST00000179876 191 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm37807-201ENSMUST00000194310 190 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm42672-201ENSMUST00000197821 352 ntBASIC2.17□□□□□ -2.06
DffbO54788 Gm43626-201ENSMUST00000198575 162 ntBASIC2.17□□□□□ -2.06
DffbO54788 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.17□□□□□ -2.06
DffbO54788 Gm45150-201ENSMUST00000206051 467 ntBASIC2.17□□□□□ -2.06
DffbO54788 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.17□□□□□ -2.06
DffbO54788 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
DffbO54788 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm25390-201ENSMUST00000157341 103 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm24691-201ENSMUST00000157762 140 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm26214-201ENSMUST00000158581 107 ntBASIC2.16□□□□□ -2.06
DffbO54788 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.16□□□□□ -2.06
DffbO54788 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm17161-201ENSMUST00000169187 524 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm27753-201ENSMUST00000184742 203 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm27505-201ENSMUST00000185071 110 ntBASIC2.16□□□□□ -2.06
DffbO54788 Mir6376-201ENSMUST00000185149 131 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm28169-201ENSMUST00000190342 345 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm43563-201ENSMUST00000196761 198 ntBASIC2.16□□□□□ -2.06
DffbO54788 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm42807-201ENSMUST00000200141 329 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm45445-201ENSMUST00000209586 232 ntBASIC2.16□□□□□ -2.06
DffbO54788 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
DffbO54788 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.16□□□□□ -2.06
DffbO54788 Gm10025-201ENSMUST00000079568 372 ntBASIC2.16□□□□□ -2.06
DffbO54788 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DffbO54788 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.15□□□□□ -2.06
DffbO54788 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
DffbO54788 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
DffbO54788 Mir344c-201ENSMUST00000103919 92 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm14838-201ENSMUST00000118913 248 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm13913-201ENSMUST00000121126 260 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm24594-201ENSMUST00000122502 99 ntBASIC2.15□□□□□ -2.07
DffbO54788 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm23223-201ENSMUST00000158119 127 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm20438-201ENSMUST00000174441 329 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm20718-201ENSMUST00000176058 259 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm25528-201ENSMUST00000180264 132 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.15□□□□□ -2.07
DffbO54788 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
DffbO54788 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm44256-201ENSMUST00000203304 335 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm44853-201ENSMUST00000209070 250 ntBASIC2.15□□□□□ -2.07
DffbO54788 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
DffbO54788 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm24977-201ENSMUST00000083106 163 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm22972-201ENSMUST00000083297 131 ntBASIC2.15□□□□□ -2.07
DffbO54788 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.15□□□□□ -2.07
DffbO54788 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.14□□□□□ -2.07
DffbO54788 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DffbO54788 Gm23128-201ENSMUST00000104257 132 ntBASIC2.14□□□□□ -2.07
DffbO54788 Mir1195-201ENSMUST00000116818 98 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm12512-201ENSMUST00000119620 217 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm23466-201ENSMUST00000157133 106 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm25711-201ENSMUST00000158633 128 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm16326-201ENSMUST00000162843 414 ntBASIC2.14□□□□□ -2.07
DffbO54788 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
DffbO54788 Gm24390-201ENSMUST00000179578 62 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm43722-201ENSMUST00000196054 124 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm23128-202ENSMUST00000196578 133 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm34314-201ENSMUST00000203622 367 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm44563-201ENSMUST00000207958 178 ntBASIC2.14□□□□□ -2.07
DffbO54788 Gm45386-201ENSMUST00000210194 218 ntBASIC2.14□□□□□ -2.07
DffbO54788 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms