Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.25□□□□□ -2.05
Nr1i3O35627 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Nr1i3O35627 Gm24856-201ENSMUST00000082809 107 ntBASIC2.25□□□□□ -2.05
Nr1i3O35627 Gm26071-201ENSMUST00000083261 107 ntBASIC2.25□□□□□ -2.05
Nr1i3O35627 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.25□□□□□ -2.05
Nr1i3O35627 Gm24521-201ENSMUST00000083958 107 ntBASIC2.25□□□□□ -2.05
Nr1i3O35627 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nr1i3O35627 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Mir541-201ENSMUST00000102097 90 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm25543-201ENSMUST00000122678 312 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm22215-201ENSMUST00000157558 96 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm24750-201ENSMUST00000157843 104 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm25454-201ENSMUST00000157947 315 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm29022-201ENSMUST00000190702 225 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Trbv6-201ENSMUST00000193743 276 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm6105-201ENSMUST00000200580 624 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Nr1i3O35627 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Gm5899-201ENSMUST00000071770 270 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Snord47-201ENSMUST00000083034 77 ntBASIC2.24□□□□□ -2.05
Nr1i3O35627 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Nr1i3O35627 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nr1i3O35627 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm22779-201ENSMUST00000104085 107 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm14922-201ENSMUST00000121131 163 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm25805-201ENSMUST00000122788 108 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm23588-201ENSMUST00000157659 99 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm22727-201ENSMUST00000158090 116 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm23209-201ENSMUST00000158667 110 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm25024-201ENSMUST00000179667 104 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Mir6402-201ENSMUST00000183406 80 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm27399-201ENSMUST00000184250 78 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm27753-201ENSMUST00000184742 203 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm37089-201ENSMUST00000195616 129 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm18000-201ENSMUST00000212153 800 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm23723-201ENSMUST00000082996 132 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Gm22973-201ENSMUST00000083298 191 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Mir208a-201ENSMUST00000083498 83 ntBASIC2.23□□□□□ -2.05
Nr1i3O35627 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nr1i3O35627 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Nr1i3O35627 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm13432-201ENSMUST00000118861 241 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm25783-201ENSMUST00000122525 190 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm23982-201ENSMUST00000157141 106 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm25428-201ENSMUST00000157608 114 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm24392-201ENSMUST00000158136 103 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm24667-201ENSMUST00000158938 103 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm29005-201ENSMUST00000186773 320 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm44533-201ENSMUST00000207782 268 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm45288-201ENSMUST00000210236 151 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm23461-201ENSMUST00000083265 107 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm25896-201ENSMUST00000083713 136 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm23039-201ENSMUST00000083870 161 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.22□□□□□ -2.05
Nr1i3O35627 Gm14020-201ENSMUST00000118165 662 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm25269-201ENSMUST00000122601 104 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm23324-201ENSMUST00000157421 131 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm23559-201ENSMUST00000157824 103 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm22537-201ENSMUST00000158172 199 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm22159-201ENSMUST00000158412 130 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm17052-201ENSMUST00000165496 289 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Mir6370-201ENSMUST00000183510 120 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm37763-201ENSMUST00000193445 120 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm44385-201ENSMUST00000198781 81 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Mir497-201ENSMUST00000200557 84 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.21□□□□□ -2.06
Nr1i3O35627 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm24204-201ENSMUST00000082950 107 ntBASIC2.21□□□□□ -2.06
Nr1i3O35627 Gm24098-201ENSMUST00000102075 109 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm25381-201ENSMUST00000102078 109 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Mir872-201ENSMUST00000104728 81 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm22151-201ENSMUST00000116963 58 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm23230-201ENSMUST00000157298 133 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm25488-201ENSMUST00000158728 118 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Mir8116-201ENSMUST00000184134 97 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Mir6540-201ENSMUST00000184886 108 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm18341-201ENSMUST00000197538 622 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm10092-201ENSMUST00000077110 180 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Nr1i3O35627 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.2□□□□□ -2.06
Nr1i3O35627 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Nr1i3O35627 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms