Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.15□□□□□ -2.07
Clk3O35492 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Clk3O35492 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Clk3O35492 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Clk3O35492 Gm22752-201ENSMUST00000102083 109 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Mir374b-201ENSMUST00000102314 95 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Clk3O35492 Gm23803-201ENSMUST00000104610 132 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm23982-201ENSMUST00000157141 106 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm23983-201ENSMUST00000157142 114 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm23324-201ENSMUST00000157421 131 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm23640-201ENSMUST00000157860 104 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm24900-201ENSMUST00000158128 134 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.14□□□□□ -2.07
Clk3O35492 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm25402-201ENSMUST00000082966 131 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Gm22866-201ENSMUST00000083947 177 ntBASIC2.14□□□□□ -2.07
Clk3O35492 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Clk3O35492 Gm24068-201ENSMUST00000104513 132 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.13□□□□□ -2.07
Clk3O35492 Gm25643-201ENSMUST00000158874 103 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Gm26435-201ENSMUST00000179026 107 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Gm29604-201ENSMUST00000187176 163 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Clk3O35492 Gm44533-201ENSMUST00000207782 268 ntBASIC2.13□□□□□ -2.07
Clk3O35492 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.13□□□□□ -2.07
Clk3O35492 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Clk3O35492 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Clk3O35492 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.13□□□□□ -2.07
Clk3O35492 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm23015-201ENSMUST00000104145 128 ntBASIC2.12□□□□□ -2.07
Clk3O35492 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm24385-201ENSMUST00000122694 350 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm22883-201ENSMUST00000157376 106 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm20438-201ENSMUST00000174441 329 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Clk3O35492 Mir7050-201ENSMUST00000184636 60 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm27369-201ENSMUST00000185182 71 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm29140-201ENSMUST00000190187 476 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm28992-201ENSMUST00000190534 139 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm44256-201ENSMUST00000203304 335 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.12□□□□□ -2.07
Clk3O35492 Gm46997-201ENSMUST00000222108 217 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm7214-201ENSMUST00000222428 272 ntBASIC2.12□□□□□ -2.07
Clk3O35492 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Clk3O35492 Gm24615-201ENSMUST00000083268 113 ntBASIC2.12□□□□□ -2.07
Clk3O35492 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Clk3O35492 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Clk3O35492 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.11□□□□□ -2.07
Clk3O35492 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm26015-201ENSMUST00000104402 125 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm22494-201ENSMUST00000104495 128 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm11936-201ENSMUST00000118323 160 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm14748-201ENSMUST00000119819 411 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm12721-201ENSMUST00000120621 268 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm16510-201ENSMUST00000153501 249 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm22554-201ENSMUST00000157798 147 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm22731-201ENSMUST00000158086 94 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm24769-201ENSMUST00000158506 129 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm26157-201ENSMUST00000158974 126 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Mir3092-201ENSMUST00000174954 96 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm37089-201ENSMUST00000195616 129 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm18546-201ENSMUST00000197245 676 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm42672-201ENSMUST00000197821 352 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Mir6925-201ENSMUST00000197857 70 ntBASIC2.11□□□□□ -2.07
Clk3O35492 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm10092-201ENSMUST00000077110 180 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm24966-201ENSMUST00000082443 79 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm22358-201ENSMUST00000082877 122 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm24044-201ENSMUST00000083107 156 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gm25188-201ENSMUST00000083913 122 ntBASIC2.11□□□□□ -2.07
Clk3O35492 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Clk3O35492 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Clk3O35492 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Clk3O35492 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.1□□□□□ -2.07
Clk3O35492 Gm16326-201ENSMUST00000162843 414 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm16561-201ENSMUST00000163001 192 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm17052-201ENSMUST00000165496 289 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm22258-201ENSMUST00000177645 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm26032-201ENSMUST00000178535 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm25210-201ENSMUST00000178813 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm25157-201ENSMUST00000178914 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm22046-201ENSMUST00000179027 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm24390-201ENSMUST00000179578 62 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm22941-201ENSMUST00000179630 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm25471-201ENSMUST00000180126 94 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Clk3O35492 Gm28921-201ENSMUST00000190219 378 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm42774-201ENSMUST00000198854 283 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.1□□□□□ -2.07
Clk3O35492 Gm45456-201ENSMUST00000210841 243 ntBASIC2.1□□□□□ -2.07
Clk3O35492 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms