Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.72□□□□□ -2.13
Srp54bE9PXC0 Gm13992-201ENSMUST00000120558 156 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm15861-201ENSMUST00000120979 339 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm8121-201ENSMUST00000153583 499 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm22217-201ENSMUST00000157556 313 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm26405-201ENSMUST00000158495 100 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm22665-201ENSMUST00000158720 275 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm29229-201ENSMUST00000188874 323 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
Srp54bE9PXC0 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Snord42a-201ENSMUST00000082606 65 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 Gm22364-201ENSMUST00000083097 98 ntBASIC1.71□□□□□ -2.14
Srp54bE9PXC0 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm13518-201ENSMUST00000120018 233 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm25805-201ENSMUST00000122788 108 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm22085-201ENSMUST00000158344 110 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm23854-201ENSMUST00000158378 108 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm24510-201ENSMUST00000174965 94 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm23921-201ENSMUST00000175258 107 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm26435-201ENSMUST00000179026 107 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm17067-202ENSMUST00000180131 123 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm9156-201ENSMUST00000189660 463 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm32175-201ENSMUST00000193641 346 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm43035-201ENSMUST00000197626 517 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm10264-201ENSMUST00000220589 429 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm46997-201ENSMUST00000222108 217 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Mir496a-201ENSMUST00000093627 79 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.7□□□□□ -2.14
Srp54bE9PXC0 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm22021-201ENSMUST00000104353 107 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm14782-201ENSMUST00000120151 195 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Rnu7-201ENSMUST00000158458 62 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm25491-201ENSMUST00000158733 308 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm17052-201ENSMUST00000165496 289 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm24572-201ENSMUST00000175505 88 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Srp54bE9PXC0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.69□□□□□ -2.14
Srp54bE9PXC0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Srp54bE9PXC0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm23013-201ENSMUST00000104146 106 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm25730-201ENSMUST00000178753 165 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm43250-201ENSMUST00000196536 273 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm20144-201ENSMUST00000203031 165 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm35736-201ENSMUST00000203681 313 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.68□□□□□ -2.14
Srp54bE9PXC0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm22281-201ENSMUST00000157198 103 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm24656-201ENSMUST00000177548 132 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm28717-201ENSMUST00000189950 315 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm23625-201ENSMUST00000082457 100 ntBASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Srp54bE9PXC0 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm11420-201ENSMUST00000120047 402 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm23232-201ENSMUST00000157300 105 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm23779-201ENSMUST00000157938 64 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm25333-201ENSMUST00000158035 246 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm25671-201ENSMUST00000178612 105 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm23307-201ENSMUST00000179167 105 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm25286-201ENSMUST00000179790 105 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Mir6905-201ENSMUST00000184228 70 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm37713-201ENSMUST00000191746 198 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm45365-201ENSMUST00000209489 256 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Mir32-201ENSMUST00000083610 70 ntBASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Srp54bE9PXC0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Gm12143-201ENSMUST00000119666 332 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Gm12785-201ENSMUST00000122052 172 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Gm23718-201ENSMUST00000157350 307 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Gm22080-201ENSMUST00000157591 106 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.65□□□□□ -2.15
Srp54bE9PXC0 Gm27421-201ENSMUST00000184729 167 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms