Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Mir466h-201ENSMUST00000104748 81 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm25720-201ENSMUST00000157503 105 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm25888-201ENSMUST00000157778 302 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm23545-201ENSMUST00000158205 104 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Snord11-201ENSMUST00000158468 84 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Mir8103-201ENSMUST00000183945 107 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm27399-201ENSMUST00000184250 78 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm32175-201ENSMUST00000193641 346 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Mir1291-201ENSMUST00000199842 117 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Gm24457-201ENSMUST00000083196 105 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Snora34-201ENSMUST00000083402 138 ntBASIC2.62□□□□□ -1.99
Ptchd4B9EKX1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm23472-201ENSMUST00000101806 191 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm23492-201ENSMUST00000116837 115 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm22193-201ENSMUST00000116868 76 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm26024-201ENSMUST00000158657 322 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Mir1936-201ENSMUST00000158699 93 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm24497-201ENSMUST00000177868 191 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm29597-201ENSMUST00000188035 308 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm29553-201ENSMUST00000189692 279 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm42834-201ENSMUST00000196845 256 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm23444-201ENSMUST00000082922 191 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm22169-201ENSMUST00000083229 107 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm23847-201ENSMUST00000083829 110 ntBASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Ptchd4B9EKX1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm24121-201ENSMUST00000102029 106 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm24896-201ENSMUST00000122741 135 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm26105-201ENSMUST00000157253 190 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm28020-201ENSMUST00000157739 67 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm25488-201ENSMUST00000158728 118 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm43676-201ENSMUST00000197532 540 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm44477-201ENSMUST00000199661 110 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Gm26126-201ENSMUST00000083188 164 ntBASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ptchd4B9EKX1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Mir878-201ENSMUST00000104680 78 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm6897-201ENSMUST00000117714 138 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm14838-201ENSMUST00000118913 248 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm14758-201ENSMUST00000119104 138 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm12143-201ENSMUST00000119666 332 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm22097-201ENSMUST00000157929 278 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm25654-201ENSMUST00000158467 88 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm24573-201ENSMUST00000175499 112 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm20613-201ENSMUST00000175828 345 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm27803-201ENSMUST00000183763 119 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 Gm37918-201ENSMUST00000192071 120 ntBASIC2.59□□□□□ -1.99
Ptchd4B9EKX1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Ptchd4B9EKX1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.59□□□□□ -2
Ptchd4B9EKX1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Ptchd4B9EKX1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Ptchd4B9EKX1 Mir767-201ENSMUST00000103256 107 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm22281-201ENSMUST00000157198 103 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm25390-201ENSMUST00000157341 103 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm22011-201ENSMUST00000158790 123 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Mir28b-201ENSMUST00000175399 80 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm25199-201ENSMUST00000083095 104 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.58□□□□□ -2
Ptchd4B9EKX1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ptchd4B9EKX1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Ptchd4B9EKX1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm16355-201ENSMUST00000128606 231 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Trav20-201ENSMUST00000142754 347 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm23536-201ENSMUST00000157541 134 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Gm24977-201ENSMUST00000083106 163 ntBASIC2.57□□□□□ -2
Ptchd4B9EKX1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ptchd4B9EKX1 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 251.7 ms