Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm43035-201ENSMUST00000197626 517 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm45456-201ENSMUST00000210841 243 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm45907-201ENSMUST00000213023 193 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm25078-201ENSMUST00000082530 107 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm24536-201ENSMUST00000083144 107 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm25789-201ENSMUST00000083294 76 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Gm26107-201ENSMUST00000083972 107 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.44□□□□□ -2.18
Trbv17A0A140T8P8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm11572-201ENSMUST00000119164 120 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Trav20-201ENSMUST00000142754 347 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm22227-201ENSMUST00000157356 259 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm25491-201ENSMUST00000158733 308 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Mir7683-201ENSMUST00000183842 61 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm27443-201ENSMUST00000184660 98 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm27959-201ENSMUST00000185172 111 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm37313-201ENSMUST00000191673 290 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm37338-201ENSMUST00000191986 127 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm36946-201ENSMUST00000192706 435 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm43220-201ENSMUST00000199299 282 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 Gm24163-201ENSMUST00000093660 132 ntBASIC1.43□□□□□ -2.18
Trbv17A0A140T8P8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm24630-201ENSMUST00000122768 106 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm22215-201ENSMUST00000157558 96 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm23474-201ENSMUST00000158884 75 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm28992-201ENSMUST00000190534 139 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm37404-201ENSMUST00000195726 359 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm44473-201ENSMUST00000204039 152 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm26493-201ENSMUST00000083155 136 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.42□□□□□ -2.18
Trbv17A0A140T8P8 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm12647-201ENSMUST00000118977 265 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm12143-201ENSMUST00000119666 332 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm25781-201ENSMUST00000122527 84 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm25914-201ENSMUST00000157618 153 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm24510-201ENSMUST00000174965 94 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Mir3057-201ENSMUST00000175040 91 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm25450-201ENSMUST00000179144 107 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Mir6419-201ENSMUST00000184784 113 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm28418-201ENSMUST00000186179 423 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Mir376a-201ENSMUST00000197584 68 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Gm25357-201ENSMUST00000082745 72 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Snora3-201ENSMUST00000083082 132 ntBASIC1.41□□□□□ -2.18
Trbv17A0A140T8P8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trbv17A0A140T8P8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.4□□□□□ -2.18
Trbv17A0A140T8P8 Gm23013-201ENSMUST00000104146 106 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm6025-201ENSMUST00000121517 201 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Mir7062-201ENSMUST00000185038 66 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm22683-201ENSMUST00000082854 137 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv17A0A140T8P8 Gm22935-201ENSMUST00000103960 104 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm6444-201ENSMUST00000119611 458 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm14937-201ENSMUST00000119709 208 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm24629-201ENSMUST00000122762 89 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm28912-201ENSMUST00000189001 234 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm42834-201ENSMUST00000196845 256 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trbv17A0A140T8P8 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Gm25090-201ENSMUST00000104000 132 ntBASIC1.38□□□□□ -2.19
Trbv17A0A140T8P8 Gm15002-201ENSMUST00000118406 452 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms