Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm45704-201ENSMUST00000212582 403 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm22508-201ENSMUST00000082772 110 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.12□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm26002-201ENSMUST00000101915 107 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm23422-201ENSMUST00000102000 107 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm22545-201ENSMUST00000104350 132 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm13475-201ENSMUST00000119290 234 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm14269-201ENSMUST00000120455 306 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm22597-201ENSMUST00000157602 80 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm22983-201ENSMUST00000158308 104 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm24897-201ENSMUST00000179033 107 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir6365-201ENSMUST00000183990 101 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm33654-201ENSMUST00000221704 215 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.11□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm12837-201ENSMUST00000120131 373 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm12779-201ENSMUST00000121496 143 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm14846-201ENSMUST00000121868 216 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Mir6389-201ENSMUST00000183661 102 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm28921-201ENSMUST00000190219 378 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm43993-201ENSMUST00000203972 247 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm44211-201ENSMUST00000204867 145 ntBASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.1□□□□□ -2.39
Trav9-4A0A0B4J1K2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.09□□□□□ -2.39
Trav9-4A0A0B4J1K2 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm22279-201ENSMUST00000157200 93 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir3079-201ENSMUST00000175428 90 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm24754-201ENSMUST00000177997 107 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm24038-201ENSMUST00000082872 159 ntBASIC0.09□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25496-201ENSMUST00000104430 120 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir466n-201ENSMUST00000104798 94 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm12433-201ENSMUST00000119659 255 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25884-201ENSMUST00000157782 62 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25643-201ENSMUST00000158874 103 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25750-201ENSMUST00000175483 112 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25633-201ENSMUST00000178565 107 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm43114-201ENSMUST00000198298 343 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm24208-201ENSMUST00000082783 135 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm22884-201ENSMUST00000083127 140 ntBASIC0.08□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm22831-201ENSMUST00000102473 109 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir1197-201ENSMUST00000117037 120 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm27402-201ENSMUST00000183890 120 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir6896-201ENSMUST00000198033 73 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm44921-201ENSMUST00000205290 301 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm23000-201ENSMUST00000157083 139 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25968-201ENSMUST00000157167 100 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25718-201ENSMUST00000158632 118 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Mir1936-201ENSMUST00000158699 93 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm26378-201ENSMUST00000179093 107 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm38231-201ENSMUST00000192030 347 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm26265-202ENSMUST00000196326 133 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm30155-201ENSMUST00000223458 339 ntBASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Trav9-4A0A0B4J1K2 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm14946-201ENSMUST00000119859 296 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm14638-201ENSMUST00000121338 216 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm23761-201ENSMUST00000158347 104 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm22764-201ENSMUST00000158370 92 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25451-201ENSMUST00000177832 121 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm24862-201ENSMUST00000179103 79 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm23310-201ENSMUST00000179105 79 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm25461-201ENSMUST00000179293 79 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm28661-201ENSMUST00000188231 681 ntBASIC0.05□□□□□ -2.4
Trav9-4A0A0B4J1K2 Gm42805-201ENSMUST00000196158 276 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms