Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm11420-201ENSMUST00000120047 402 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm23668-201ENSMUST00000157465 111 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm26024-201ENSMUST00000158657 322 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm10092-201ENSMUST00000077110 180 ntBASIC1.48□□□□□ -2.17
Trbv3A0A0A6YYE2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Mir653-201ENSMUST00000102402 85 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm23889-201ENSMUST00000122689 104 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm24958-201ENSMUST00000158009 97 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm22159-201ENSMUST00000158412 130 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm25490-201ENSMUST00000158734 130 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm8023-201ENSMUST00000195298 903 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm44419-201ENSMUST00000203338 229 ntBASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.47□□□□□ -2.17
Trbv3A0A0A6YYE2 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22488-201ENSMUST00000116811 127 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm14845-201ENSMUST00000121259 306 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm26345-201ENSMUST00000157534 120 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22537-201ENSMUST00000158172 199 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm23474-201ENSMUST00000158884 75 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24366-201ENSMUST00000175383 86 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22114-201ENSMUST00000177756 107 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm23055-201ENSMUST00000082805 94 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm26111-201ENSMUST00000083969 106 ntBASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm12512-201ENSMUST00000119620 217 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm43587-201ENSMUST00000199590 204 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm45296-201ENSMUST00000209625 205 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.45□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm23836-201ENSMUST00000104434 129 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22032-201ENSMUST00000116946 116 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm14761-201ENSMUST00000121363 262 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm25781-201ENSMUST00000122527 84 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24478-201ENSMUST00000157439 158 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22315-201ENSMUST00000158010 143 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm23759-201ENSMUST00000158351 268 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm37089-201ENSMUST00000195616 129 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24164-201ENSMUST00000093663 104 ntBASIC1.44□□□□□ -2.18
Trbv3A0A0A6YYE2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24275-201ENSMUST00000116780 146 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm14922-201ENSMUST00000121131 163 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm16328-201ENSMUST00000126985 196 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24737-201ENSMUST00000158861 100 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm7958-201ENSMUST00000178255 468 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm7950-201ENSMUST00000179633 468 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm27369-201ENSMUST00000185182 71 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22249-201ENSMUST00000082485 136 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm25930-201ENSMUST00000082785 107 ntBASIC1.43□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm25407-201ENSMUST00000104102 134 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm22099-201ENSMUST00000157925 123 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24572-201ENSMUST00000175505 88 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm24038-201ENSMUST00000082872 159 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Mir155-201ENSMUST00000083463 65 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm25513-201ENSMUST00000083861 162 ntBASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm26135-201ENSMUST00000101993 72 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Snord50b-201ENSMUST00000178497 72 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm26968-201ENSMUST00000182894 481 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Mir7675-201ENSMUST00000184262 58 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Gm28409-201ENSMUST00000187064 103 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Mir3535-201ENSMUST00000197651 147 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 Mir497-201ENSMUST00000200557 84 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.41□□□□□ -2.18
Trbv3A0A0A6YYE2 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms