Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm37709-201ENSMUST00000195074 600 ntBASIC-0.56□□□□□ -2.5
Trav4d-3A0A075B625 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.56□□□□□ -2.5
Trav4d-3A0A075B625 AC159885.1-201ENSMUST00000222221 199 ntBASIC-0.56□□□□□ -2.5
Trav4d-3A0A075B625 Gm23645-201ENSMUST00000083228 108 ntBASIC-0.56□□□□□ -2.5
Trav4d-3A0A075B625 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm14551-201ENSMUST00000120802 256 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm24417-201ENSMUST00000178123 79 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm24653-201ENSMUST00000178541 79 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm25934-201ENSMUST00000178642 79 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm46136-201ENSMUST00000214730 565 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.57□□□□□ -2.5
Trav4d-3A0A075B625 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm25213-201ENSMUST00000102388 113 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm24535-201ENSMUST00000083140 107 ntBASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.58□□□□□ -2.5
Trav4d-3A0A075B625 Gm8858-201ENSMUST00000118259 342 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Gm11219-201ENSMUST00000118565 358 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.59□□□□□ -2.5
Trav4d-3A0A075B625 Mir709-201ENSMUST00000102190 88 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm23641-201ENSMUST00000157857 101 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 AC154552.4-201ENSMUST00000222171 151 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Mir344-201ENSMUST00000083634 95 ntBASIC-0.6□□□□□ -2.51
Trav4d-3A0A075B625 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Atp2b4-208ENSMUST00000167348 243 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm38231-201ENSMUST00000192030 347 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 AC154552.5-201ENSMUST00000222352 207 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 AC167977.2-201ENSMUST00000225676 682 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Snora75-201ENSMUST00000082903 133 ntBASIC-0.61□□□□□ -2.51
Trav4d-3A0A075B625 Gm25088-201ENSMUST00000101803 79 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm14368-201ENSMUST00000145305 415 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm23924-201ENSMUST00000082474 108 ntBASIC-0.62□□□□□ -2.51
Trav4d-3A0A075B625 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm14887-201ENSMUST00000119522 663 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm25269-201ENSMUST00000122601 104 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm24854-201ENSMUST00000158025 98 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm22418-201ENSMUST00000180326 107 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 AC102369.2-201ENSMUST00000219725 1679 ntBASIC-0.63□□□□□ -2.51
Trav4d-3A0A075B625 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Snord89-201ENSMUST00000104516 110 ntBASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Gm26249-201ENSMUST00000116708 118 ntBASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Gm37923-201ENSMUST00000191624 161 ntBASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.64□□□□□ -2.51
Trav4d-3A0A075B625 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 166.4 ms