Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm3550W4VSN7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Gm5643-201ENSMUST00000117081 966 ntBASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Gm12382-201ENSMUST00000122005 922 ntBASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Gm37292-201ENSMUST00000192062 758 ntBASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm3550W4VSN7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3550W4VSN7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3550W4VSN7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms