Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn8aQ9WTU3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn8aQ9WTU3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Ank2-226ENSMUST00000189368 339 ntBASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn8aQ9WTU3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn8aQ9WTU3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn8aQ9WTU3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn8aQ9WTU3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scn8aQ9WTU3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn8aQ9WTU3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms