Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shroom3Q9QXN0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Gm17971-201ENSMUST00000190239 806 ntBASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
Shroom3Q9QXN0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Gm9103-201ENSMUST00000119371 405 ntBASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom3Q9QXN0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Gm7370-201ENSMUST00000219471 767 ntBASIC17■□□□□ 0.31
Shroom3Q9QXN0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Il3ra-202ENSMUST00000223589 738 ntBASIC17■□□□□ 0.31
Shroom3Q9QXN0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Shroom3Q9QXN0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Gm2274-201ENSMUST00000184539 609 ntBASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.99■□□□□ 0.31
Shroom3Q9QXN0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms