Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sec61a2Q9JLR1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Mir1199-201ENSMUST00000117015 119 ntBASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a2Q9JLR1 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a2Q9JLR1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a2Q9JLR1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms