Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Gm13186-201ENSMUST00000118031 316 ntBASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Gm21559-201ENSMUST00000220638 855 ntBASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Gm8587-201ENSMUST00000076538 843 ntBASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx5Q9JL61 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Gm26039-201ENSMUST00000158152 144 ntBASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Gm18101-201ENSMUST00000215769 548 ntBASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Phf7-203ENSMUST00000226565 1971 ntBASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx5Q9JL61 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Gm10013-201ENSMUST00000106074 672 ntBASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx5Q9JL61 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Gm6659-201ENSMUST00000174752 547 ntBASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx5Q9JL61 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms