Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Mir7071-201ENSMUST00000184847 69 ntBASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a3bpQ9EQG9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Gm24841-201ENSMUST00000158676 357 ntBASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a3bpQ9EQG9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a3bpQ9EQG9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Col4a3bpQ9EQG9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.45■□□□□ 0.7
Col4a3bpQ9EQG9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.44■□□□□ 0.7
Col4a3bpQ9EQG9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms