Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp4cQ9D7F7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.33■□□□□ 0.85
Chmp4cQ9D7F7 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.33■□□□□ 0.85
Chmp4cQ9D7F7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp4cQ9D7F7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Chmp4cQ9D7F7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Gm10653-202ENSMUST00000139570 835 ntBASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chmp4cQ9D7F7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Gm43183-201ENSMUST00000200632 547 ntBASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chmp4cQ9D7F7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Gm12382-201ENSMUST00000122005 922 ntBASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp4cQ9D7F7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4cQ9D7F7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Gm10517-202ENSMUST00000192970 758 ntBASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4cQ9D7F7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms