Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf225Q9D7D1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf225Q9D7D1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf225Q9D7D1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf225Q9D7D1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf225Q9D7D1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf225Q9D7D1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rnf225Q9D7D1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms