Protein–RNA interactions for Protein: Q9D6G3

2900055J20Rik, RIKEN cDNA 2900055J20 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2900055J20RikQ9D6G3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
2900055J20RikQ9D6G3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
2900055J20RikQ9D6G3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
2900055J20RikQ9D6G3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
2900055J20RikQ9D6G3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
2900055J20RikQ9D6G3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms