Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Gm25745-201ENSMUST00000174945 133 ntBASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Taf1dQ9D4V4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Gm15920-201ENSMUST00000118998 402 ntBASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Gm27628-201ENSMUST00000184911 107 ntBASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.36■□□□□ 0.85
Taf1dQ9D4V4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Gm10175-201ENSMUST00000086013 645 ntBASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Taf1dQ9D4V4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Gm8097-201ENSMUST00000117903 829 ntBASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Fst-202ENSMUST00000223640 2612 ntBASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1dQ9D4V4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Gm44430-201ENSMUST00000203376 995 ntBASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Gm7506-201ENSMUST00000207758 815 ntBASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Taf1dQ9D4V4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Taf1dQ9D4V4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Taf1dQ9D4V4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Taf1dQ9D4V4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Taf1dQ9D4V4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Gm13036-201ENSMUST00000117799 748 ntBASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Gm6550-201ENSMUST00000187574 993 ntBASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1dQ9D4V4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Taf1dQ9D4V4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms