Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chaf1bQ9D0N7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Gm10418-201ENSMUST00000100943 576 ntBASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chaf1bQ9D0N7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chaf1bQ9D0N7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Chaf1bQ9D0N7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chaf1bQ9D0N7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Chaf1bQ9D0N7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Chaf1bQ9D0N7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chaf1bQ9D0N7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Gm42642-201ENSMUST00000200683 355 ntBASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chaf1bQ9D0N7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Gm13401-201ENSMUST00000117074 291 ntBASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Gm13216-201ENSMUST00000117145 591 ntBASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chaf1bQ9D0N7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms