Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Gm10849-201ENSMUST00000100397 618 ntBASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssu72Q9CY97 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssu72Q9CY97 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Ssu72Q9CY97 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssu72Q9CY97 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssu72Q9CY97 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ssu72Q9CY97 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Gm5874-201ENSMUST00000096101 508 ntBASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ssu72Q9CY97 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssu72Q9CY97 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms