Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nip7Q9CXK8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nip7Q9CXK8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nip7Q9CXK8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Gm43514-201ENSMUST00000198852 424 ntBASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nip7Q9CXK8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nip7Q9CXK8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Gm11452-201ENSMUST00000122376 690 ntBASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nip7Q9CXK8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Gm29707-201ENSMUST00000196325 491 ntBASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nip7Q9CXK8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Gm15372-201ENSMUST00000120729 834 ntBASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Gm18421-201ENSMUST00000204122 625 ntBASIC21.1■□□□□ 0.97
Nip7Q9CXK8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nip7Q9CXK8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Gm10052-201ENSMUST00000168019 960 ntBASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Gm7729-201ENSMUST00000050143 801 ntBASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nip7Q9CXK8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nip7Q9CXK8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nip7Q9CXK8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Nip7Q9CXK8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms