Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20■□□□□ 0.79
Smc3Q9CW03 Gm26596-201ENSMUST00000180464 2655 ntBASIC20■□□□□ 0.79
Smc3Q9CW03 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc3Q9CW03 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Gm12441-201ENSMUST00000121806 588 ntBASIC19.99■□□□□ 0.79
Smc3Q9CW03 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smc3Q9CW03 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Gm18666-201ENSMUST00000190039 958 ntBASIC19.98■□□□□ 0.79
Smc3Q9CW03 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc3Q9CW03 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.97■□□□□ 0.79
Smc3Q9CW03 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Smc3Q9CW03 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.97■□□□□ 0.79
Smc3Q9CW03 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc3Q9CW03 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.96■□□□□ 0.79
Smc3Q9CW03 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc3Q9CW03 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.95■□□□□ 0.78
Smc3Q9CW03 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.95■□□□□ 0.78
Smc3Q9CW03 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Gm24841-201ENSMUST00000158676 357 ntBASIC19.95■□□□□ 0.78
Smc3Q9CW03 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc3Q9CW03 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.94■□□□□ 0.78
Smc3Q9CW03 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms