Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Gm26039-201ENSMUST00000158152 144 ntBASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsm7Q9CQQ8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsm7Q9CQQ8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lsm7Q9CQQ8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm7Q9CQQ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Gm21362-201ENSMUST00000194272 928 ntBASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm7Q9CQQ8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Gm33142-201ENSMUST00000193913 867 ntBASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lsm7Q9CQQ8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm7Q9CQQ8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.16■□□□□ 0.34
Lsm7Q9CQQ8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lsm7Q9CQQ8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms