Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.63■□□□□ 0.41
Q9CQC3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Q9CQC3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.63■□□□□ 0.41
Q9CQC3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q9CQC3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.63■□□□□ 0.41
Q9CQC3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CQC3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.62■□□□□ 0.41
Q9CQC3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.62■□□□□ 0.41
Q9CQC3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.62■□□□□ 0.41
Q9CQC3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.62■□□□□ 0.41
Q9CQC3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Q9CQC3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CQC3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Q9CQC3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9CQC3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Q9CQC3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Q9CQC3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Q9CQC3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Q9CQC3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Q9CQC3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.61■□□□□ 0.41
Q9CQC3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.61■□□□□ 0.41
Q9CQC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Q9CQC3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Q9CQC3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.61■□□□□ 0.41
Q9CQC3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CQC3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
Q9CQC3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q9CQC3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.6■□□□□ 0.41
Q9CQC3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Q9CQC3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.6■□□□□ 0.41
Q9CQC3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CQC3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CQC3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CQC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CQC3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CQC3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CQC3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Q9CQC3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.59■□□□□ 0.41
Q9CQC3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.59■□□□□ 0.41
Q9CQC3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.59■□□□□ 0.41
Q9CQC3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.59■□□□□ 0.41
Q9CQC3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Q9CQC3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms