Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.85■□□□□ 0.29
Trim33Q99PP7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.85■□□□□ 0.29
Trim33Q99PP7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.85■□□□□ 0.29
Trim33Q99PP7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim33Q99PP7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.85■□□□□ 0.29
Trim33Q99PP7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Gm38027-201ENSMUST00000192315 235 ntBASIC16.84■□□□□ 0.29
Trim33Q99PP7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.84■□□□□ 0.29
Trim33Q99PP7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
Trim33Q99PP7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim33Q99PP7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim33Q99PP7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.82■□□□□ 0.28
Trim33Q99PP7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim33Q99PP7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim33Q99PP7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms