Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Gm10576-201ENSMUST00000191927 825 ntBASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 AV026068-213ENSMUST00000223675 1171 ntBASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh15Q99PJ1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh15Q99PJ1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh15Q99PJ1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh15Q99PJ1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh15Q99PJ1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh15Q99PJ1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh15Q99PJ1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh15Q99PJ1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Gm6089-201ENSMUST00000197666 938 ntBASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh15Q99PJ1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdh15Q99PJ1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Gm12497-201ENSMUST00000138778 237 ntBASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh15Q99PJ1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Gm4459-201ENSMUST00000118750 468 ntBASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms