Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Gm12260-201ENSMUST00000122447 411 ntBASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Gm15590-201ENSMUST00000078419 552 ntBASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh23Q99PF4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Gm25990-201ENSMUST00000102440 86 ntBASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh23Q99PF4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cdh23Q99PF4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh23Q99PF4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Gm6550-201ENSMUST00000187574 993 ntBASIC17.31■□□□□ 0.36
Cdh23Q99PF4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh23Q99PF4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh23Q99PF4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh23Q99PF4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms